Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma19g00908 | ATGGTGGCCATGGCCTCCAGCGGAGTGCCTTCCATCCCTTCGTCAATATCCCCGCCGCCGGTCACTTTGCCGCTCAAAAACATCCCCGGCAGTCATGGCTTGCCGCTGTTCGGATCCATCGCCGACCGCCTGGATTACTTCTGGTTTCAAGGACCGGACAAGTTCTTCAGGAGTCGGATGGAGAAGAATCGAAGCACGGTTTTCAGGACGAATGTCCCTCCGTCATTCCCCTTCATCTTAAGCGATCCGAAAGTGACTGCGGTTCTCGATTGCAAGTCGTTTGCGCATCTGTTCGACATGGAGGTAGTGGAGAAGAAGAATGTTCTGGTCGGCGATTTCATGCCCAGCACTAGCTTCACCGGAAACATGAGAGTGTGTGCCTATTTGGATACGTCGGAATCTCAACACTCGAAGATTAAGAACTTCACCATAGACATCCTGCGGCGGAGCTCGAAGATTTGGATACCCGAGCTGGAATCCAACCTCTCCACGTTTTGGGACGGCATTGAATCCGAAATCGCAAACAACCAAAAATCCAGCTTCAGAAACCTTCTCCAACCAGCTCTTTTCAATTTCTTCTCCAAAACCCTGGTCGGCGCCGATACTGCAAAATCACCGGAAGTGGCGAAATCCGCCCACATCGACGTCATCATCTGGCTCGGCCTCCAGCTCGTCCCCACCATTCACCTCGGCATTTTCCAGCCCCTCGAGGAAATCTTCCTCCACTCTTTCCGATTACCCTTCTTCCCCATCGCCGGCCGGTACCGGAGACTCTACGATTTCATCGAAAAGGAAGGGGAAGAAGTGGTGCAGCGAGGCGTTTCCGAGTTCGGGTTGAAGAAGGATGAAGCCATTCACAATCTTATCTTCACCTTAGGATTCAACGCCTACGGTGGATTCAGCCTCTTTCTTCCGGTTCTAATGGATCGTATACTCAACGACAGAACCGGCTTACAACAGAGAATCGTCGACGAAGTGAGGGCAAAATCCGGGTCGGGACTAACATTTGAGTCCGTCAAGGAGATGGAGCTGGTCTACTCCTTCGTGTACGAGACGCTCCGGCTGGACCCGCCGGTTCCGACCCAATACGCGAGAGCGAGGAAGGATTTCAAGCTAAGTTCGCACGATGCAGTGTTCGACATCAAGAAGGGGGAGCTGCTTTGTGGGTATCAGCCACTGGTGATGAGGGACCCCAACGTGTTCGAGGAGCCGGAGGCGTTTAAGCCGGACCGGTTCAGGGAGGAGAAAGGGGCGGCGCTGCTGGATTATCTGTTCTGGTCAAACGGGCCGCAGACGGGGATGGCCAGCGAGCATAACAAGCAATGTGCAGCGAAGGATTTGGTGGTGCTGACGGCGGTGGTATTTGTGGCTTACATATTTCGAAGGTATGATTCAATTGCAGGGGAGGGCGGTTCGATTACAACACTCCAAAGGCCTAATTGA | 1443 | 53.29 | MVAMASSGVPSIPSSISPPPVTLPLKNIPGSHGLPLFGSIADRLDYFWFQGPDKFFRSRMEKNRSTVFRTNVPPSFPFILSDPKVTAVLDCKSFAHLFDMEVVEKKNVLVGDFMPSTSFTGNMRVCAYLDTSESQHSKIKNFTIDILRRSSKIWIPELESNLSTFWDGIESEIANNQKSSFRNLLQPALFNFFSKTLVGADTAKSPEVAKSAHIDVIIWLGLQLVPTIHLGIFQPLEEIFLHSFRLPFFPIAGRYRRLYDFIEKEGEEVVQRGVSEFGLKKDEAIHNLIFTLGFNAYGGFSLFLPVLMDRILNDRTGLQQRIVDEVRAKSGSGLTFESVKEMELVYSFVYETLRLDPPVPTQYARARKDFKLSSHDAVFDIKKGELLCGYQPLVMRDPNVFEEPEAFKPDRFREEKGAALLDYLFWSNGPQTGMASEHNKQCAAKDLVVLTAVVFVAYIFRRYDSIAGEGGSITTLQRPN | 480 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 8223293 | 8226025 | + | CmaCh19G009080.1 | Cma19g00908 | 315596 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma19g00908 | 480 | PANTHER | INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED | 18 | 468 | - | - | |
Cma19g00908 | 480 | Pfam | Cytochrome P450 | 318 | 418 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma19g00908 | 480 | PRINTS | E-class P450 group IV signature | 342 | 358 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma19g00908 | 480 | PRINTS | E-class P450 group IV signature | 379 | 393 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma19g00908 | 480 | PRINTS | E-class P450 group IV signature | 395 | 413 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma19g00908 | 480 | SUPERFAMILY | Cytochrome P450 | 23 | 467 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma19g00908 | 480 | Gene3D | Cytochrome P450 | 23 | 477 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma19g00908 | 480 | PANTHER | CYTOCHROME P450 26 | 18 | 468 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma19g00908 | Cma-Chr19:8223293 | Cma09g00945 | Cma-Chr9:4754604 | 1.63E-10 | dispersed | |
Cma19g00908 | Cma-Chr19:8223293 | Cma19g00641 | Cma-Chr19:6819021 | 9.58E-128 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma19g00908 | K10528 | - | csv:101223126 | 811.216 |