Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g00908 ATGGTGGCCATGGCCTCCAGCGGAGTGCCTTCCATCCCTTCGTCAATATCCCCGCCGCCGGTCACTTTGCCGCTCAAAAACATCCCCGGCAGTCATGGCTTGCCGCTGTTCGGATCCATCGCCGACCGCCTGGATTACTTCTGGTTTCAAGGACCGGACAAGTTCTTCAGGAGTCGGATGGAGAAGAATCGAAGCACGGTTTTCAGGACGAATGTCCCTCCGTCATTCCCCTTCATCTTAAGCGATCCGAAAGTGACTGCGGTTCTCGATTGCAAGTCGTTTGCGCATCTGTTCGACATGGAGGTAGTGGAGAAGAAGAATGTTCTGGTCGGCGATTTCATGCCCAGCACTAGCTTCACCGGAAACATGAGAGTGTGTGCCTATTTGGATACGTCGGAATCTCAACACTCGAAGATTAAGAACTTCACCATAGACATCCTGCGGCGGAGCTCGAAGATTTGGATACCCGAGCTGGAATCCAACCTCTCCACGTTTTGGGACGGCATTGAATCCGAAATCGCAAACAACCAAAAATCCAGCTTCAGAAACCTTCTCCAACCAGCTCTTTTCAATTTCTTCTCCAAAACCCTGGTCGGCGCCGATACTGCAAAATCACCGGAAGTGGCGAAATCCGCCCACATCGACGTCATCATCTGGCTCGGCCTCCAGCTCGTCCCCACCATTCACCTCGGCATTTTCCAGCCCCTCGAGGAAATCTTCCTCCACTCTTTCCGATTACCCTTCTTCCCCATCGCCGGCCGGTACCGGAGACTCTACGATTTCATCGAAAAGGAAGGGGAAGAAGTGGTGCAGCGAGGCGTTTCCGAGTTCGGGTTGAAGAAGGATGAAGCCATTCACAATCTTATCTTCACCTTAGGATTCAACGCCTACGGTGGATTCAGCCTCTTTCTTCCGGTTCTAATGGATCGTATACTCAACGACAGAACCGGCTTACAACAGAGAATCGTCGACGAAGTGAGGGCAAAATCCGGGTCGGGACTAACATTTGAGTCCGTCAAGGAGATGGAGCTGGTCTACTCCTTCGTGTACGAGACGCTCCGGCTGGACCCGCCGGTTCCGACCCAATACGCGAGAGCGAGGAAGGATTTCAAGCTAAGTTCGCACGATGCAGTGTTCGACATCAAGAAGGGGGAGCTGCTTTGTGGGTATCAGCCACTGGTGATGAGGGACCCCAACGTGTTCGAGGAGCCGGAGGCGTTTAAGCCGGACCGGTTCAGGGAGGAGAAAGGGGCGGCGCTGCTGGATTATCTGTTCTGGTCAAACGGGCCGCAGACGGGGATGGCCAGCGAGCATAACAAGCAATGTGCAGCGAAGGATTTGGTGGTGCTGACGGCGGTGGTATTTGTGGCTTACATATTTCGAAGGTATGATTCAATTGCAGGGGAGGGCGGTTCGATTACAACACTCCAAAGGCCTAATTGA 1443 53.29 MVAMASSGVPSIPSSISPPPVTLPLKNIPGSHGLPLFGSIADRLDYFWFQGPDKFFRSRMEKNRSTVFRTNVPPSFPFILSDPKVTAVLDCKSFAHLFDMEVVEKKNVLVGDFMPSTSFTGNMRVCAYLDTSESQHSKIKNFTIDILRRSSKIWIPELESNLSTFWDGIESEIANNQKSSFRNLLQPALFNFFSKTLVGADTAKSPEVAKSAHIDVIIWLGLQLVPTIHLGIFQPLEEIFLHSFRLPFFPIAGRYRRLYDFIEKEGEEVVQRGVSEFGLKKDEAIHNLIFTLGFNAYGGFSLFLPVLMDRILNDRTGLQQRIVDEVRAKSGSGLTFESVKEMELVYSFVYETLRLDPPVPTQYARARKDFKLSSHDAVFDIKKGELLCGYQPLVMRDPNVFEEPEAFKPDRFREEKGAALLDYLFWSNGPQTGMASEHNKQCAAKDLVVLTAVVFVAYIFRRYDSIAGEGGSITTLQRPN 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8223293 8226025 + CmaCh19G009080.1 Cma19g00908 315596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g00908 480 PANTHER INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED 18 468 - -
Cma19g00908 480 Pfam Cytochrome P450 318 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00908 480 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00908 480 PRINTS E-class P450 group IV signature 379 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00908 480 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00908 480 SUPERFAMILY Cytochrome P450 23 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00908 480 Gene3D Cytochrome P450 23 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g00908 480 PANTHER CYTOCHROME P450 26 18 468 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma19g00908 Cma-Chr19:8223293 Cma09g00945 Cma-Chr9:4754604 1.63E-10 dispersed
Cma19g00908 Cma-Chr19:8223293 Cma19g00641 Cma-Chr19:6819021 9.58E-128 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g00908 K10528 - csv:101223126 811.216