Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma19g00931 | ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCTAAAGAGTACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTTAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGACAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCCACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGGTTTCTGA | 342 | 44.74 | MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF | 113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 8323374 | 8325341 | - | CmaCh19G009310.1 | Cma19g00931 | 315619 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma19g00931 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
Cma19g00931 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743 | |
Cma19g00931 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743|GO:0006413 | |
Cma19g00931 | 113 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 6 | 113 | IPR005874 | GO:0003743 | |
Cma19g00931 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 102 | IPR001950 | GO:0003743|GO:0006413 | |
Cma19g00931 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | - | |
Cma19g00931 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743 | |
Cma19g00931 | 113 | Gene3D | - | 1 | 113 | - | - | |
Cma19g00931 | 113 | SUPERFAMILY | eIF1-like | 4 | 113 | IPR036877 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01834 | Cma-Chr11:12249549 | Cma19g00931 | Cma-Chr19:8323374 | 1.34E-56 | dispersed | |
Cma11g01835 | Cma-Chr11:12252767 | Cma19g00931 | Cma-Chr19:8323374 | 1.31E-55 | dispersed | |
Cma19g00930 | Cma-Chr19:8319318 | Cma19g00931 | Cma-Chr19:8323374 | 1.56E-80 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma19g00931 | K03113 | - | csv:101219651 | 228.409 |