Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g01066 ATGGTTGGCGGGAAAATTGTTGTCAGCGAGTACGTAGGTGCGCCACTGTACAGAAGCATAAAGGGAAGCAAAAAGGTACCGCCTGGGCAAATGGGTCTGCCCTGGATTGGTCAAACCATGGCTTTCTACAGAGCCCAACGTAAAAATAGATTGTTCGAAGACTTTGTTGGGCCTCGAGTGGCTAAATATGGCAAAATCTTCAAAACAAGTTTGATGGGGTCGCCGACGGTGGTCATAAATGGAGCTGAAGCCAACAGATTTTTCTTGTCCAATGAGTTTAAGTTGGTGGTAAGCTCATGGCCGGCGGCCTCTGTTCAGCTGATGGGCGAAGAATGCATCATGCAGAAGCAAGGTGAAAGCCACCGATGTGTGCGTGGCCTTATTGCCGCAAGCCTTGCCAGTTCGAGTCTCGAAGCAATGATGCCTAAATTGTGCACTACAATTCAGCTTCATTTGGACACCAAATGGGTTGGCCATGACATAATTAGTCTCTACCACTCGGCAAAAGTATTGACGTTTTCCATAGTGTTTGAGTGTTTGATGGGTATCAAAGTGGAGCCACGCATGTTGACGACATTCGAGAGGGTTTTGGAAGGAGTTTTTGCACTACCGTTCAGTTTTCCAGGCACACGATTTTCGAGAGCCAAGAAAGCAAGGATGGAGATAGGGAAAATGCTAAGGGAGGTGGTGAGAGAGAAGAGGAGGAGAATTGAAGAAGAGCTAGAAGAAGAAGAATGTGAGTTGTTGCTTTCAAGGATGGTGAGAGCAATGATAAGAGGGGAGATCAGCGAAGTGGAAGTGGTGGACAATGTGGTTTTGCTTGTTTTTGCAGCTCATGATACAACCTCCTTCGCCATTGCCATGACTTTCAAAATGTTGGCTCAGCACCCAAGCTGCTACTCACTTCTTCTACAGGAACATGCTGACATAGTGAGAAGCAAGGGAGCAGGCCAGAATTTGACGATGGAAGATATAAAGAAGATGAAATATACTTGGCAGGTAGCTCGTGAGAGCATTCGACTGTTTCCTCCTATATTTGGTTCATTCAGGAAAGCCATTACAGACATTGAATATGAGGGATTTTTCATTCCCAAGGGATGGAAGGTCTTGTGGACGATGTATGGAACGCATCTCGAAGACGAGTATTTTGAAGATCCATTGAGTTTCAAGCCAAGCAGATTTGAGGAACCTGTTTCCCAGTATGTCTATGTTCCATTTGGAGGAGGGCCAAGAGCTTGTGCAGGCTACCAGCTGGCGAAATTGAACATCCTCATCTTTATACACTTGGTTGTAACTCGTTATGATTGGAGTTTAATCCACCCAGATGAGACAATCATAATGGATCCCCTCCCTATCCCTTCTCATGGAATGCAAACTAAGATTTCTCCAAAATCAGAAGTTCGCCCCAATGTTCAGCAAATGTAA 1425 45.4 MVGGKIVVSEYVGAPLYRSIKGSKKVPPGQMGLPWIGQTMAFYRAQRKNRLFEDFVGPRVAKYGKIFKTSLMGSPTVVINGAEANRFFLSNEFKLVVSSWPAASVQLMGEECIMQKQGESHRCVRGLIAASLASSSLEAMMPKLCTTIQLHLDTKWVGHDIISLYHSAKVLTFSIVFECLMGIKVEPRMLTTFERVLEGVFALPFSFPGTRFSRAKKARMEIGKMLREVVREKRRRIEEELEEEECELLLSRMVRAMIRGEISEVEVVDNVVLLVFAAHDTTSFAIAMTFKMLAQHPSCYSLLLQEHADIVRSKGAGQNLTMEDIKKMKYTWQVARESIRLFPPIFGSFRKAITDIEYEGFFIPKGWKVLWTMYGTHLEDEYFEDPLSFKPSRFEEPVSQYVYVPFGGGPRACAGYQLAKLNILIFIHLVVTRYDWSLIHPDETIIMDPLPIPSHGMQTKISPKSEVRPNVQQM 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 8953994 8957284 + CmaCh19G010660.1 Cma19g01066 315754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g01066 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Cma19g01066 474 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 24 462 - -
Cma19g01066 474 Gene3D Cytochrome P450 18 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 SUPERFAMILY Cytochrome P450 18 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 Pfam Cytochrome P450 27 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma19g01066 474 PANTHER CYTOCHROME P450 26 24 462 - -
Cma19g01066 474 Coils Coil 227 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00945 Cma-Chr9:4754604 Cma19g01066 Cma-Chr19:8953994 5.93E-102 dispersed
Cma19g01066 Cma-Chr19:8953994 Cma16g00505 Cma-Chr16:2597830 1.92E-76 dispersed
Cma19g01066 Cma-Chr19:8953994 Cma10g00855 Cma-Chr10:4141943 4.35E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g01066 - - cmos:111455006 838.565