Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma19g01096 | ATGTCCATGGCGTCTTCATCTTTAGGTTTTATCTTTGCTCTTTCTGCTATTGCTTCCATCGTCACCCACCTCGTTGTTTTGTCTGAAGCTCAAAATCCAACTCAACCCACCACCGATCCTGATCAAGCAAGAGCTTTGAATTCCATATTTAGTCAATGGAAGATATCGGCGCCATCAGGGGTGTGGAATATAAGCGGGAATCTGTGCAGTGGGAGGGCAGTCAACACTACCACGCCCATTGACAGCTATGGAAACCCCATTCCTCTTATAAAATGCAATTGCTCAGCCAACAATGGTGCAACTTGCCTCATTACTCAACTGAACGTTTATGCAATAAATGTTGTTGGTATACTCCCACCAGAGCTATGGACATTAACGTCCCTCACCTATCTGAAGTTGGATCAAAATTTCTTGACAGGAACACTATCTGCATCTGTTGGTAATCTCACAGAATTGCGGAGCTTGAGCCTGGGCACTAATGCATTATCAGGGGAACTTCCGAAGGAACTTGGATCTCTTTCTAAACTGGAAATGTTGGCTCTCGGGTCCAACAATTTCTCTGGTTCCTTACCACCAGAGCTTGGAAATCTTTCTATGTTGAAGAAACTATACATCGATAGCTCTGGAGTTACTGGTGGTATTCCTCAATCATTTTCACGTCTAAGAAACTTGAATACAGTATGGGCATCGGACAATGACCTCAGTGGCAGAATACCTGATTTCATCGGGAGTTGGACAGGGCTCACAACTTTGAGGTTTCAAGGAAACTCTTTTACAGGTCCCATACCGTCGACATTTTCAAACTTGACATCTTTGACCGAGTTGAGAATAGGTGAATTATCCAATGGGAGCTCTTCTCTATCATTCGTCAGTAATATGACATCTCTAACTATCCTGGTGCTGAGAAATAATAATATGACAGGTTCAATTCCATCCAACATTGGAGAATTTCGTAGTCTTACCCTGCTGGACTTGAGCTTCAACAACTTGACAGGAGAGATTCCAAGCTCGCTTTTCAATTTGAGTTCACTGTCACACTTGTTTCTTGGAAATAATAAGTTAACTGGGACCCTACCTACACAAAAGAGTGCATCACTTCTTAATATAGACTTGTCATATAATGATTTATCAGGGAGCTTTCCTTCTTGGATCAACCAGCAAAACTTACAGCTAAATTTAGTCGCCAACAATTTCATCATGGAAGGTTCAAGTATCAGTGGGTTGCCTTCGGGATTGCATTGTCTTCAACGAAACTTTCCTTGTAATCGAGACCGTCCAATATATTCTGATTTTGGGATCAAATGTGGCGGTCCTCAGTTCAGAAGTTCATCAGGGATTTTGTTTGAAGCGGAAAAGGAGACTCTCGGTCCTGCTACGTACTTTGTTACCGAGTCAAATAGGTGGGCGGTGAGTAATACTGGATACTTCACTGGGTCCAACAATTCTGAATACATAGCCAATACATTGTCTCAATTCCCAAACACCCTTGTGGGAGAACTTTATCAGACACAGCGACTATCTGCTTCATCATTGAGATACTACGGACTCGGACTTCAGAATGGCAACTACACCGTGAACCTTTATTTTGCAGAAATAGTTCTCTCAGATTCAAATACATGGCAAAGCCGTGAGAGGCGTCTCTTTGATATATATATACAGGGAAATCGTGTTGTACAGAATTTTAATATTAGAAAGGAAGCAGGTGGGTCTTTCCTTGCTGTCCCAAAGAACTTCACGGCGGAAGTTACAGAAAATTTCCTGGAAATTCATCTCTTTTGGGCGGGGAAAGGTACATGCTGCATACCAAATCAGGGTGCTTTTGGACCTTCCGTTTCAGCCATCAGTGCTACCCCAGATTTTAAACCAAATGTCAGTAACGTACCTCCAAGTACTAAGGAGAATAGTAGAACGGGCCTAATTGCAAGGGAGGATAATAGAAAGGGCCTAATTGTAGGTCTCTTTGTTGGGTTAGGATCTGTTTTCTTTCTGATTATTGGCGCAGTTTTCTTTATCGTCCAGAGAAGGAATAGGCGTCGTGCCAATGAAGATGAAGAGCTCCTGGGGATAGATGCTAGACCGTACACTTTTAGTTATTCTGAACTAAGGGGTGCTACAAGCGACTTCAATTCATCCAACAAACTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAACACTAAGTGATGGAAGAATGGTTGCTGTGAAGCAACTCTCAGTGGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCCACAGTATCTGCAGTGCAGCATCGCAATCTTGTGAAATTATATGGATGTTGCATCGAGGCCGATAAACGTCTCCTTGTTTATGAGTTTCTTGAAAACAAGAGTCTTGACCAAGCATTATTTGGAAAAAAACATTTGATTATTGATTGGGCAAAACGTTTTGACATATGCGTGGGTGTAGCAAGGGGCCTCACTTACCTTCATGAGGAATCAAGACTTCGCATAGTGCACAGAGACGTTAAGGCCAGTAACATCCTGCTTGATGGTAATCTGATTCCCAAAATTTCAGATTTTGGCTTAGCTAAACTTTACGACGACAAAAAGACTCATATAAGCACTCGTGTTGCTGGGACAATTGGTTATCTTGCACCTGAGTATGCCATGCGTGGCCACCTTACGGAGAAGGCTGATGTGTTTGGATTTGGCGTTGTGGCTCTTGAAATTGTGAGCGGAAGGCCGAATTCATACCCAAGCTTAGAGCAACACAAAATATATCTTCTTGATTGGACATGGTACCTCCACGAAAACAACCGTGAACTGGAGATGGTGGATCCTGAATTATCAGAGTTCAGCAAGGAGGAAGTAAAGAGGGTGATTGGTGTAGCTCTTCTGTGCACTCAAACATCCCCAGCTCTTCGGCCATCCATGTCCCGCGTGGTAGCAATGCTGACTGGAGACGTTGAAGTGGCCGCTGTAACTTCCAAACCAGGATACCTGATAGACTGGAAATTTGATGACATTACAAGCTTTATTGATACTCCATCAACTGAAGAACCTGATAGTAGCCTTTATGCATCAACAAGTTCGAATGTTGTTGATATAAAGCAATTGCCAGACAAACCACTGCTCCATGAATCATTTGGGGCCGGGTAG | 3132 | 43.14 | MSMASSSLGFIFALSAIASIVTHLVVLSEAQNPTQPTTDPDQARALNSIFSQWKISAPSGVWNISGNLCSGRAVNTTTPIDSYGNPIPLIKCNCSANNGATCLITQLNVYAINVVGILPPELWTLTSLTYLKLDQNFLTGTLSASVGNLTELRSLSLGTNALSGELPKELGSLSKLEMLALGSNNFSGSLPPELGNLSMLKKLYIDSSGVTGGIPQSFSRLRNLNTVWASDNDLSGRIPDFIGSWTGLTTLRFQGNSFTGPIPSTFSNLTSLTELRIGELSNGSSSLSFVSNMTSLTILVLRNNNMTGSIPSNIGEFRSLTLLDLSFNNLTGEIPSSLFNLSSLSHLFLGNNKLTGTLPTQKSASLLNIDLSYNDLSGSFPSWINQQNLQLNLVANNFIMEGSSISGLPSGLHCLQRNFPCNRDRPIYSDFGIKCGGPQFRSSSGILFEAEKETLGPATYFVTESNRWAVSNTGYFTGSNNSEYIANTLSQFPNTLVGELYQTQRLSASSLRYYGLGLQNGNYTVNLYFAEIVLSDSNTWQSRERRLFDIYIQGNRVVQNFNIRKEAGGSFLAVPKNFTAEVTENFLEIHLFWAGKGTCCIPNQGAFGPSVSAISATPDFKPNVSNVPPSTKENSRTGLIAREDNRKGLIVGLFVGLGSVFFLIIGAVFFIVQRRNRRRANEDEELLGIDARPYTFSYSELRGATSDFNSSNKLGEGGFGPVYKGTLSDGRMVAVKQLSVASHQGKSQFVAEIATVSAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFGKKHLIIDWAKRFDICVGVARGLTYLHEESRLRIVHRDVKASNILLDGNLIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPNSYPSLEQHKIYLLDWTWYLHENNRELEMVDPELSEFSKEEVKRVIGVALLCTQTSPALRPSMSRVVAMLTGDVEVAAVTSKPGYLIDWKFDDITSFIDTPSTEEPDSSLYASTSSNVVDIKQLPDKPLLHESFGAG | 1043 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 9091084 | 9102332 | - | CmaCh19G010960.1 | Cma19g01096 | 315784 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma19g01096 | 1043 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 141 | 1028 | - | - | |
Cma19g01096 | 1043 | CDD | STKc_IRAK | 714 | 978 | - | - | |
Cma19g01096 | 1043 | Gene3D | Transferase(Phosphotransferase) domain 1 | 784 | 987 | - | - | |
Cma19g01096 | 1043 | Gene3D | Ribonuclease Inhibitor | 207 | 283 | IPR032675 | - | |
Cma19g01096 | 1043 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 828 | 840 | IPR008271 | GO:0004672|GO:0006468 | |
Cma19g01096 | 1043 | Gene3D | - | 431 | 618 | - | - | |
Cma19g01096 | 1043 | SUPERFAMILY | Protein kinase-like (PK-like) | 692 | 1012 | IPR011009 | - | |
Cma19g01096 | 1043 | Gene3D | Ribonuclease Inhibitor | 284 | 417 | IPR032675 | - | |
Cma19g01096 | 1043 | SMART | serkin_6 | 708 | 976 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma19g01096 | 1043 | Pfam | Malectin domain | 431 | 614 | IPR021720 | - | |
Cma19g01096 | 1043 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 141 | 1028 | - | - | |
Cma19g01096 | 1043 | Gene3D | Phosphorylase Kinase; domain 1 | 670 | 783 | - | - | |
Cma19g01096 | 1043 | ProSiteProfiles | Protein kinase domain profile. | 708 | 982 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma19g01096 | 1043 | Pfam | Protein tyrosine and serine/threonine kinase | 711 | 975 | IPR001245 | GO:0004672|GO:0006468 | |
Cma19g01096 | 1043 | SUPERFAMILY | L domain-like | 103 | 410 | - | - | |
Cma19g01096 | 1043 | Gene3D | Ribonuclease Inhibitor | 62 | 206 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma18g00359 | Cma-Chr18:1947657 | Cma19g01096 | Cma-Chr19:9091084 | 2.67E-101 | dispersed | |
Cma19g01096 | Cma-Chr19:9091084 | Cma19g01059 | Cma-Chr19:8910273 | 0 | dispersed | |
Cma19g01094 | Cma-Chr19:9079003 | Cma19g01096 | Cma-Chr19:9091084 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69356 | PF07714 | PK_Tyr_Ser-Thr | 4.00E-47 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma19g01096 | - | - | cpep:111811393 | 1973.75 |