Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma19g01119 ATGTTCAAATTCTCTCTTCTTTTTGTTTCCCTCTGTCTCCCTGCTCTTGTCTCCGGCGGGCGGGAGTCATGCACGTGTGACTCCGATGCCGCCACCGCCGCCGCCGCCGAGCACAACGCCGCACAGGAAGCGATCAAGTACAAGCTGGGGTCGATTGCTTCGGTGTTGGCGGCCGGAGCTGCAGGGGTGAGCCTTCCTTTGGTGGGCAAGAGGATTCCGTCTCTGAGGCCTGAAAAGGACATATTTTTCATGATCAAGGCCTTTGCTGCAGGGGTCATTTTAGGCACTGGGTTCGTCCACATACTCCCCGACGCCTTCCAAGATTTAACCTCCCCCTGCATTGGACAAAATCCTTGGGCCAACTTCCCTGTCGCGGGGTTCATTGCAATGGCCTCCTCCATCGGCACCTTGATGGTCGACACATTTGCAACCACCTTTTACCACAGACGCCACTTCAGTAAACCCAAGCAGGTACTTGCAGACCAGGAAACAGCCGAGGAGCATGCCGGTCACGTGCATGTTCACACCCACGCCACACATGGCCACGCTCACGGCTCCACCGCCGCCGCCGTACCCACGGAAGATTTGAGTCTCACAGAGTTAATCCGGTACCGGATTATATCTCAGGTGTTGGAATTGGGAATTGTGATTCATTCAGTAATAATTGGTATATCTCTTGGTACCTCCCAGAGCCCTGCTACCATTAAGCCGCTGCTGGTAGCTCTGTCTTTCCACCAGTTTTTTGAGGGCATGGGCCTCGGTGGCTGCATATCCCAGAACTTGAGAGACAGAGAGAGAGAGAGAGTAGAAGGAAAGGGTGGAGTAGAGATGAAGCAAGAAACACACACAGAGACACACACAGCGAGGATGGATTTCACCGGACTCCGCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCGTATCCACTTCTACCACTCATTTCTTCACTCCCTGTGATGCTAGAAGTGTGCACAGAAGGTCCAAGAAACTCCAGCTGGCGAAATACTTGGATGTAATTGGGCAAAAGGTGAGCCACGTGGATGGTGGGACCAATTCCCAACCTTACGTGAGCTCCCCGTTTACTCTCCCGCCATTCGATTCGTTGCCGGACAACGCGCCCCCTTACTGCTCTTATCCCCCAGCTTCTCCTCTGCCTCCCTCCTCGCCCTTCACCTACATTTCATCGCCGCCGCCGCCGCCCTTCTATTATCTTCCCCCACTGCTCCCACCTCCCACCCCAACCTACGGCTCTCCCCCCAGCTTCACCCCGCCTTACTATTACGAGCCCAGCCCTCCAAGCTACGTTCCCAGCCCACCCTCTCCCACGGTGTTCGTGCCGAGCCCACCCGTGTTCCAGCCACCCGTCATTTACCCTCCCCCGAGCGTGCCGCCCCCTCCCCACTCCGCACCCAATATAGCCCTTTGGTGCGTGGCCAAGCCCTCCGTGCCTGACCCAATCATTCAAGAGGCCATGAACTATGCCTGCGGGACGGTGGCGGATTGCGATACCATTCTCCCCAACGGACCCTGCTTTCTGCCCAACACACTCATCGCCCACGCTTCCTACGCCTTCAATAGCTATTGGCAGAGAACCAAGGTCGGCGGCGGCACCTGTGAGTTCGGCGGTACCGCCATGCTTGTCACCGTGGATCCCAAACCAAAACCCTATTCGCCTACCATCCTTTTCTCCTCCTCTATCTGCCGCCTGCAGCTTGGTGCAATCGCCATGGAGGACGGCTTTGCAGCTGAAAAGCTCTTCAATCAGGGATTTTCCTATACCTACGACGACGTCATCTTCCTTCCTCACTACATTGACTTCCCCACTGACGCCGTCCAGCTCGCTACCCGACTCACCCGCAATATCTCCCTCTCTATTCCCTGCGTCTCTTCCCCCATGGACACCGTCACCGAAGCCTACATGGCTTCCGCCATGGCTGCTCTTGGTGGCATCGGTATCATCCACTCCAATTCCCCTGCCGCCCAACAGGCTGCCATGGTTCATGCCGCCAAGGCCCGCCGTGTTCCAATTTTGTCTAATCCCGTTTTCAAGTCCCCATCCGATCGGATTGACTCGGAGGAGGATTTTGCTTCTTCGCCCTTTGTTTTGGTTACTGAGTCAGGTACCTCCAAGTCGAAGCTCTTGGGCCATGTCTCCTACGCGGACTGGACCTCCCAGGCGAACAAGGATGTGAAAATATATGATTATATGGTTAATTCGGGGGCTTCAGTTCCGTGGAACTATGATTTAGCGCAAGTGGACACGTTCTTAGCGGAGAAGAAGAAGGACTTTGTGCCGCTGTTGAAGGACGATGAAATTGTGGATGTTGTAACCAAGCCAGAAGTGGAGAGAATCAAGAGTTATCCTAAACTGGGCGTTGGCTCGGTTGCGGCCGATGGTTCCTGGCTGGTAGGGGCTTCGATTGGAACGAGGGAGCATGACAAGGAGAGGTTGAAGCTTTTGGTGCAGGCCGGTGTAAACGTAGTGGTGTTAGATAGTTCACAGGGAAACTCCAGTTATCAAATTGATATGATAAAGTATGTGAAGCGGACATATCCAGAGTTGGACGTGATTGGCGGGAATGTGGTTACGATGGCACAGGCCCAGAATTTGATTCAGGCGGGTGTCGACGGCTTGCGGATTGGGATGGGTTCTGGATCTATCTGTACCACGCAGGAGGTTTGTGCGGTTGGACGAGGACAGGCGACTGCGGTTTACAAGGTCTCATTAGTTGCTTCGCAAAGTGGCGTGCCTGTCATCGCTGATGGTGGAATTTCAAACTCTGGGCATATTGTTAAGGCTATAGTTCTTGGTGCATCCACGGTAATGATGGGAAGTTTCTTGGCTGGAAGCACCGAGGCCCCTGGGGCATTCGAAACTAAGAATGGTCAGCGTGTGAAGAAGTATCGTGGGATGGGCTCTTTAGAAGCAATGACCAAAGGTAGTGATGCCAGGTACTTGGGGGATACTGCAACCCTTAAGATAGCTCAAGGGGTTGTTGGAGCAGTTGCTGATAAGGGTTCAGTCTTGAAGTTCATACCCTACACTATGCAAGCAGTCAAGCAAGGGTTCCAAGATCTTGGTGCTTCCTCCATCAAATCTGCCCATGACCTCTTAAGTTCAAAGATTTTAAGGCTAGAGGTACGCTCAGGGGCAGCACAGGTCGAAGGTGGCATTCATGGACTGGTGTCGTATGAAAAGAGATCGTTTTGA 3216 53.95 MFKFSLLFVSLCLPALVSGGRESCTCDSDAATAAAAEHNAAQEAIKYKLGSIASVLAAGAAGVSLPLVGKRIPSLRPEKDIFFMIKAFAAGVILGTGFVHILPDAFQDLTSPCIGQNPWANFPVAGFIAMASSIGTLMVDTFATTFYHRRHFSKPKQVLADQETAEEHAGHVHVHTHATHGHAHGSTAAAVPTEDLSLTELIRYRIISQVLELGIVIHSVIIGISLGTSQSPATIKPLLVALSFHQFFEGMGLGGCISQNLRDRERERVEGKGGVEMKQETHTETHTARMDFTGLRRRLLLLLLLLLFVSTSTTHFFTPCDARSVHRRSKKLQLAKYLDVIGQKVSHVDGGTNSQPYVSSPFTLPPFDSLPDNAPPYCSYPPASPLPPSSPFTYISSPPPPPFYYLPPLLPPPTPTYGSPPSFTPPYYYEPSPPSYVPSPPSPTVFVPSPPVFQPPVIYPPPSVPPPPHSAPNIALWCVAKPSVPDPIIQEAMNYACGTVADCDTILPNGPCFLPNTLIAHASYAFNSYWQRTKVGGGTCEFGGTAMLVTVDPKPKPYSPTILFSSSICRLQLGAIAMEDGFAAEKLFNQGFSYTYDDVIFLPHYIDFPTDAVQLATRLTRNISLSIPCVSSPMDTVTEAYMASAMAALGGIGIIHSNSPAAQQAAMVHAAKARRVPILSNPVFKSPSDRIDSEEDFASSPFVLVTESGTSKSKLLGHVSYADWTSQANKDVKIYDYMVNSGASVPWNYDLAQVDTFLAEKKKDFVPLLKDDEIVDVVTKPEVERIKSYPKLGVGSVAADGSWLVGASIGTREHDKERLKLLVQAGVNVVVLDSSQGNSSYQIDMIKYVKRTYPELDVIGGNVVTMAQAQNLIQAGVDGLRIGMGSGSICTTQEVCAVGRGQATAVYKVSLVASQSGVPVIADGGISNSGHIVKAIVLGASTVMMGSFLAGSTEAPGAFETKNGQRVKKYRGMGSLEAMTKGSDARYLGDTATLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSIKSAHDLLSSKILRLEVRSGAAQVEGGIHGLVSYEKRSF 1071
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9194576 9203470 + CmaCh19G011190.1 Cma19g01119 315807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma19g01119 1071 CDD IMPDH 593 1038 IPR001093 GO:0003824
Cma19g01119 1071 SUPERFAMILY CBS-domain pair 702 783 IPR046342 -
Cma19g01119 1071 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 584 1070 - -
Cma19g01119 1071 Pfam X8 domain 476 547 IPR012946 -
Cma19g01119 1071 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 577 1071 - -
Cma19g01119 1071 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 593 1069 IPR005990 GO:0003938|GO:0006164
Cma19g01119 1071 SMART IMPDH_2 592 1061 - -
Cma19g01119 1071 SMART X8_cls 476 571 IPR012946 -
Cma19g01119 1071 Pfam IMP dehydrogenase / GMP reductase domain 594 1061 IPR001093 GO:0003824
Cma19g01119 1071 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 593 1037 IPR005990 GO:0003938|GO:0006164
Cma19g01119 1071 Gene3D - 471 568 - -
Cma19g01119 1071 PRINTS Proline rich extensin signature 451 472 - -
Cma19g01119 1071 PRINTS Proline rich extensin signature 431 443 - -
Cma19g01119 1071 PRINTS Proline rich extensin signature 407 423 - -
Cma19g01119 1071 PRINTS Proline rich extensin signature 390 402 - -
Cma19g01119 1071 Pfam ZIP Zinc transporter 47 259 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cma19g01119 1071 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 577 1071 IPR005990 GO:0003938|GO:0006164
Cma19g01119 1071 Gene3D Aldolase class I 581 1071 IPR013785 -
Cma19g01119 1071 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 880 892 IPR015875 GO:0016491
Cma19g01119 1071 TIGRFAM zip: ZIP zinc/iron transport family 34 260 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00699 Cma-Chr9:3292122 Cma19g01119 Cma-Chr19:9194576 8.91E-30 dispersed
Cma13g00436 Cma-Chr13:4933094 Cma19g01119 Cma-Chr19:9194576 1.69E-52 dispersed
Cma18g00546 Cma-Chr18:3514491 Cma19g01119 Cma-Chr19:9194576 2.84E-56 dispersed
Cma19g01119 Cma-Chr19:9194576 Cma05g00093 Cma-Chr5:397954 1.05E-46 dispersed
Cma11g01981 Cma-Chr11:12966451 Cma19g01119 Cma-Chr19:9194576 1.47E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma19g01119 K00088 - csv:101217193 915.22