Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g00081 ATGGCCTCTCTGGCGCTGACTTCCTCGTATCTCCCTTCTCTCCGGTCGCGCCTTCCGAAATCTGATTCAAATGCTCAAATTCGCTGCTCCTCTCTCCGTTCCAGTCTTCCCAAAACCGCCATTTTCGGAAATGGCATCAGAACTAGCTTCCGCAATCCGTCTTCTCTATCAAGTGAAGCTAAATCCGTTAAACCAGCTCTAAATATCGGAAGCTCTCGTGGAAATCTCAGTGCTTTTACTGTCCGAGCGGCTTCTTCTTCTTCTTCTGCTGCTGCTGTAGCTCCGGCTTCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTTATTGCTTCGATTGCTACGGGTATCATTTTGTGGTTTGTTCCGGTTCCGTCTGGTGTTTCTCGAAACGCGTGGCAATTGCTCGCGATTTTCCTCGCTACCATTGTTGGGATTATAACTCAGCCATTGCCTCTTGGTGCTGTTGCTTTGCTGGGACTAGGCGCATCTGTTCTGACTAAAACCCTAACTTTCTCTGCTGCCTTCTCTGCGTTTGGTGATCCCATCCCATGGCTCATCGCTCTTGCCTTCTTCTTTGCTCGGGGTTTCATTAAGACCGGACTTGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCGTCGTTAGGGTTAGGGTACAGTTTAGTATTCAGTGAGGCCCTGTTGGCGCCGGCAATTCCCTCGGTGTCGGCCAGAGCAGGAGGGATATTCCTTCCACTGGTGAAATCGCTTTGTGTTGCTTGCGGTAGCAATGTTGGTGATGGTACGGAGAACCGGTTGGGATCGTGGTTGATGCTCACTTGCTTTCAAACTTCGGTGATTTCATCATCCATGTTCTTGACGGCTATGGCTGCTAATCCTCTGAGTGCGACTCTGACGTATAACACAATTAAGCAGACGATTGGATGGACCGACTGGGCTAAAGCAGCGATTGTTCCAGGATTGATCTCCTTGATTGTGGTGCCATTGCTTTTGTATGTGATCTATCCGCCCACGGTGAAAAGCAGTCCAGATGCACCAAAGCTTGCCAGAGAGAAGTTGGACAAGATGGGACCAATGACCAAGAATGAGATCATAATGGCTGGAACTCTGCTTCTCACGGTGGGTCTTTGGGTTTTTGGAGGGGTTCTTAATGTGGACGCTGTTACTGCTGCCATCTTGGGATTGTCCGTCCTTCTTGTTACAGGCGTTGTGACATGGAAAGAGTGCTTGGGAGAAGCTGTTGCCTGGGACACTCTTACATGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTCATCTCCTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGTGGACTTGGCCTTTCATGGCAGCTGTCGTTCGGCATTTTAGTTCTTCTCTATTTCTACTCCCACTACTTCTTTGCAAGTGGAGCTGCTCACATAGGCGCAATGTTTACCGCCTTCTTATCTGTTGCTAGTGCTTTGGGGACGCCCCCCTACTTTGGAGCAATAGTACTTTCCTTCTTATCTAACCTGATGGGTGGCCTAACCCACTACGGCATTGGCTCAGCGCCTGTCTTCTATGGTGCCAACTATGTTCCTCTTGCTCAATGGTGGGGCTATGGGTTCATCGTCTCTATTGTCAACATCATTATCTGGCTTGGCGCTGGAGGAATGTGGTGGAAGGCCATCGGTTTATGGTGA 1713 49.04 MASLALTSSYLPSLRSRLPKSDSNAQIRCSSLRSSLPKTAIFGNGIRTSFRNPSSLSSEAKSVKPALNIGSSRGNLSAFTVRAASSSSSAAAVAPASQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENRLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVIYPPTVKSSPDAPKLAREKLDKMGPMTKNEIIMAGTLLLTVGLWVFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLGEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFIVSIVNIIIWLGAGGMWWKAIGLW 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 351263 355327 + CmaCh20G000810.1 Cma20g00081 315895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g00081 570 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 70 570 - -
Cma20g00081 570 CDD ArsB_NhaD_permease 142 564 - -
Cma20g00081 570 Pfam Sodium:sulfate symporter transmembrane region 107 570 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cma20g00081 570 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 122 564 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cma20g00081 570 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 70 570 IPR030676 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g01248 Cma20g00081 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00403 Cma-Chr4:2059268 Cma20g00081 Cma-Chr20:351263 2.19E-149 dispersed
Cma16g00265 Cma-Chr16:1245458 Cma20g00081 Cma-Chr20:351263 4.87E-153 dispersed
Cma20g00081 Cma-Chr20:351263 Cma02g01248 Cma-Chr2:7335133 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g00081 - - bhj:120088316 1008.44