Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma20g00305 | ATGGATCTCCTCCTCCTTGAGAAGGCTCTAATCGGCCTCTTCATCGCCATGGTTCTTGCCATCGCCATTTCCAAGTTACGCGGCAAGCGATTCAAGCTTCCGCCGGGGCCGTTGCCGGTGCCTATATTCGGAAACTGGCTCCAGGTCGGCGATGACTTGAACCACCGCAATCTGACAGAACTTGCCAATAAATTCGGCGATATTTTCATGCTCCGGATGGGACAGAGGAGCCTCGTGGTGGTTTCCTCGCCGGAACTGGCCAAGGAAGTGCTCCACACGCAGGGAGTCGAGTTTGGATCTCGAACCAGAAACGTCGTTTTCGACATCTTCACCGGTAAAGGTCAGGATATGGTCTTCACCGTATATGGTGAGCATTGGAGGAAAATGAGACGGATCATGACAGTTCCGTTTTTCACTAACAAAGTGGTCCAGCAATACCGTCAGGGATGGGAGGATGAGGCCGCTAGTGTAGTGGAGGATGTGAAGAAGAATCCAGAATCGGCGACGACCGGAGTCGTTCTCCGGCAGCGATTGCAGCTTATGATGTACAACAACATGTACAGGATTATGTTCGACAGAAGATTCGAGAGTGAAGACGATCCTCTGTTTCTCAAACTTAGGGCTCTGAACGGAGAGAGGAGCCGATTAGCGCAGAGCTTCGATTACAACTATGGCGACTTCATCCCTATCTTGAGGCCGTTCTTGAGAGGATATCTCAAAACGTGCAAGGAAGTCAAGGAAACAAGGCTCAAACTCTTCAAGGATTATTTTGTCGATGAGAGGAAGAAATTGGCGAACACGAAGAAGACGACAAACGAGGGATTGAAATGTGCAATTGATCATATGTTGGATGCGCAACAGAAGGGAGAAATCAACGAAGACAATCTGCTTTACATTGTTGAGAATATCAATGTTGCAGCAATTGAAACAACGTTGTGGTCAATTGAATGGGGGATTGCGGAGCTAGTGAACCACCCAGAAATCCAAAGGAAGTTGAGGAATGAGCTCGACACTGTACTCGGACCCGGGGTTCAAATTACTGAGCCGGACGCCATCAAGCTCCCATACCTCCAAGCCGTGATCAAGGAGACCCTCCGCCTTCGCATGGCTATTCCTTTGCTTGTGCCCCATATGAACCTCCACAACGCCAAGCTAGGCGGCTACGACATTCCAGCTGAGAGCAAGATCTTGGTCAATGCATGGTGGCTTGCTAACAACCCAGCCAACTGGAAGAACCCAGAAGAGTTCCGCCCCGAGAGGTTCTTGGAGGAGGAGTCCAAGGTAGAGGCCAACGGCAACGATTTCAGATACCTACCCTTCGGTGTTGGGCGAAGGAGCTGTCCTGGCATCATCCTGGCTTTGCCTATCCTTGCCATCACAATTGGGCGTTTGGTTCAGAACTTTGAGCTCCTTCCCCCTCCTGGTCACTCCAAGTTGGACACCACAGAAAAAGGTGGGCAATTTAGCTTACACATATTGAAGCACTCCACCATTGTTGCTAAGCCCAGGGTGTTCTAG | 1518 | 50.26 | MDLLLLEKALIGLFIAMVLAIAISKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTELANKFGDIFMLRMGQRSLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRQGWEDEAASVVEDVKKNPESATTGVVLRQRLQLMMYNNMYRIMFDRRFESEDDPLFLKLRALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKTCKEVKETRLKLFKDYFVDERKKLANTKKTTNEGLKCAIDHMLDAQQKGEINEDNLLYIVENINVAAIETTLWSIEWGIAELVNHPEIQRKLRNELDTVLGPGVQITEPDAIKLPYLQAVIKETLRLRMAIPLLVPHMNLHNAKLGGYDIPAESKILVNAWWLANNPANWKNPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILAITIGRLVQNFELLPPPGHSKLDTTEKGGQFSLHILKHSTIVAKPRVF | 505 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 1493472 | 1495781 | + | CmaCh20G003050.1 | Cma20g00305 | 316119 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma20g00305 | 505 | Pfam | Cytochrome P450 | 34 | 495 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 440 | 449 | IPR017972 | GO:0005506|GO:0016705 | |
Cma20g00305 | 505 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 1 | 505 | - | - | |
Cma20g00305 | 505 | SUPERFAMILY | Cytochrome P450 | 34 | 503 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | P450 superfamily signature | 359 | 370 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 1 | 505 | - | - | |
Cma20g00305 | 505 | Gene3D | Cytochrome P450 | 21 | 496 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 358 | 376 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00305 | 505 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma10g01011 | Cma20g00305 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g00735 | Cma-Chr1:3865362 | Cma20g00305 | Cma-Chr20:1493472 | 0 | dispersed | |
Cma05g00731 | Cma-Chr5:4119909 | Cma20g00305 | Cma-Chr20:1493472 | 0 | dispersed | |
Cma12g00931 | Cma-Chr12:7220212 | Cma20g00305 | Cma-Chr20:1493472 | 0 | dispersed | |
Cma20g00305 | Cma-Chr20:1493472 | Cma14g00501 | Cma-Chr14:2445850 | 3.11E-91 | dispersed | |
Cma02g00678 | Cma-Chr2:4161597 | Cma20g00305 | Cma-Chr20:1493472 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma20g00305 | K00487 | - | csv:101221846 | 942.184 |