Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g00753 ATGGCCAACGAAGAAGACGATCTTGATCTTCTCCTTTCTCTCCAAGATAAAGTCGTTGAAACTCCTCCTGGAACTCCGCCTCATGCCTCAGATTTACTCTCCGACAATGAATCACCAAGACGAGCGGGTCATGCGGATATGTCTATCTTTAGAAGCGCTGTCAAAGATTGCCTTGACTATGCTCACATACCAACTGAGAAAAGTGGAAAAACAAACCGGTCTAAGGCCTCTGACGACGTTACAATCGAGAAGTTCTCTGGTTTGAGAGTGAGGAATCAACTGGTAGGACCTGTAGAGCTTCACGATCGTTTTTCTGACATTCGCTTTGTTCGTTTGTCTACCATAAAGAATCTGTTGGTTGGGGACACCCTTTCAGGCTGTTGGGTAACTGTAGGAGTGTTGACTGAGAAAGGGAGCCCAAAGACAAGCTCTACAGGGAAAGCTTACTGCATTTGGAAACTTAGTTGTTTGGATGAAAACGCTGTTTCTGTTTTCTTATTTGGTGATGCATATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCAGTGTTTAACTCTACAGTACGCAAGGATGCAATGGGCATGGGGTTTTCTTTAAGTGTGTATCAATCAAGCCAGTTGTTAAAGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGCAAGAAGAAGGATGGGATGGCTTGTACAACAGTAATAAATAGGCGACGTGGCATATACTGTAAATATCATAAATCAAAGGCATCAGAAAAATATTCCACCACCATACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATCATCATCTCAAGGCAGAAGGAGTTTACATGGTAAATCCGCTAGTCGGTAAAGTGAATTCTAAACATCGAGCGTCGCCAGCAAAACTGTTGTCTGTGGAAGGCCTGAAAAAGGCATTGAGCAATGCAGATAATGTGACCACCAATGTACACTCACAAGGGAAAAGATTCCTTGCCGAGATCACAGGGAAAATGACTGATAAAAGTGGAAATAAAGAACTTTCCAGACAAAGTCAGCAGAGGATCAGTTCAGAGAAGACGTCAATTTTGAAGTCATCTGGAGTTGAAAATCAACAAGATCCAAAAAGAAAGAAAACGAGCCATGCTCCGGCAGACAAAACCACAAAAGACATGGGAAAGATGGTGGAGTTGGATTATATTATACGGGCAACGGTCAGGTATGGCAACCCGCAACAACCGGTGGAAAACTTGAATTCCGCTTTTGGTGGACCACGCAAAATTACCGGATACCATAGTCATGCTGAGCTTCGTCGACCAACCCTTTCAAGTTTTAGAGAGTGA 1338 43.5 MANEEDDLDLLLSLQDKVVETPPGTPPHASDLLSDNESPRRAGHADMSIFRSAVKDCLDYAHIPTEKSGKTNRSKASDDVTIEKFSGLRVRNQLVGPVELHDRFSDIRFVRLSTIKNLLVGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENAVSVFLFGDAYKRNCKELAGTVFAVFNSTVRKDAMGMGFSLSVYQSSQLLKMGTSDDYGVCKGKKKDGMACTTVINRRRGIYCKYHKSKASEKYSTTIRTELKGGNLRTAFRDHHLKAEGVYMVNPLVGKVNSKHRASPAKLLSVEGLKKALSNADNVTTNVHSQGKRFLAEITGKMTDKSGNKELSRQSQQRISSEKTSILKSSGVENQQDPKRKKTSHAPADKTTKDMGKMVELDYIIRATVRYGNPQQPVENLNSAFGGPRKITGYHSHAELRRPTLSSFRE 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3526391 3534028 - CmaCh20G007530.1 Cma20g00753 316567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g00753 445 PANTHER PROTEIN MCM10 HOMOLOG 43 379 IPR040184 GO:0003690|GO:0003697|GO:0006270
Cma20g00753 445 Gene3D - 73 247 IPR012340 -
Cma20g00753 445 MobiDBLite consensus disorder prediction 17 41 - -
Cma20g00753 445 MobiDBLite consensus disorder prediction 344 368 - -
Cma20g00753 445 MobiDBLite consensus disorder prediction 369 389 - -
Cma20g00753 445 Pfam Primase zinc finger 213 255 IPR015408 GO:0005634|GO:0006260
Cma20g00753 445 MobiDBLite consensus disorder prediction 339 389 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00257 Cma-Chr2:1147855 Cma20g00753 Cma-Chr20:3526391 8.80E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g00753 K10736 - csv:101219022 668.307