Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g00757 ATGGCCGCTTATCTCTCCCCTCTCTTCTTCTTCTTTCTTTTGATTGTTCATCGATTGACAGTTTCGGCCGATTCGCCATTGAAGAAGACCTTCATCTTCCGTGTGGATCGTTTCTCTAAGCCCTCTGTTTTTCCCACCCATTACCACTGGTACACTTCTGAGTTTGCAGAATCCCACAAAATCCTCCATGTTTACGACACCGTTTTCCATGGATTCTCTGCAACTCTCACTCAACAACAAGTTGATTCCATCGGGAAACACCCTTCTGTGCTCGCCGTTTTTGAGGATCGTCGCCGGCAGCTTCACACCACCCGTTCCCCTCAGTTTCTTGGCCTTCGAAACCAGCGTGGTCTCTGGTCGGATTCTGATTATGGGTCGGATGTAATCATTGGGGTTTTCGACACTGGGATTTCCCCCGAACGGCGAAGCTTCTCCGATGTGAATTTGGGGCCGATTCCTCGCCGGTGGAAGGGGGTTTGTGAGACGGGAACTAAGTTCACGGCTAGAAACTGTAATAGGAAGATCGTCGGTGCGAGGTTTTTCTCTAAGGGTCATGAAGCTGGGTCCAACGCTGCCGGTCCGATTATTGGGATTAACGACACGATTGAGTTTAGATCTCCGAGAGATGCCGACGGCCATGGGACTCATACGGCCTCCACGGCGGCTGGGCGCCATGCGTTTCAGGCGAGTTTGGAGGGTTTTGCTTCTGGGATAGCGAAGGGTGTGGCTCCTAAAGCGCGTTTGGCGGTTTATAAAGTTTGTTGGAAAAATTCTGGTTGTTTTGATTCTGACATTCTTGCGGCATTTGATGCGGCGGTTAACGACGGCGTGGATGTCATTTCGATCTCGATTGGAGGCGGCGATGGGGTTTCCTCGCCGTATTATCTCGACCCAATTGCAATCGGAGCGTACGGCGCCGCTTCCAGGGGTATCTTCGTTTCGTCTTCGGGTGGGAATGATGGACCTAATGGAATGTCAGTGACGAACTTGGCGCCGTGGGTTACGACCGTTGGAGCCGGTACGATTGACCGTAATTTCCCGGCGGTGGTGACTCTAGGTAACGGACGGAGGATTTCCGGCGTGTCACTCTACGCCGGAGCGCCTTTGAACGCTACAATGTTTCCATTGGTTTACCCTGGGAAATCAGGGGTGCTCTCTGTTTCGCTCTGTATGGATAACTCTCTCGATCCTAAGGTTGTTGCCGGAAAAATTGTGATCTGCGACAGGGGAAGTAGTCCCAGAGTGGCTAAGGGTTTGGTCGTTAAGAAAGCCGGCGGCGTCGGAATGATTCTGGCGAATGGAATCTCAAACGGCGAAGGACTCGTCGGGGACGCCCATCTTCTTCCCGCTTGCGCAGTCGGCTCCGACGAAGGAGATTCCATGAAAGCCTACGCATCGTCCTCTGCAAATCCCACCGCCACCATCGCCTTCCAGGGCACTATAATCGGAATCAAACCGGCGCCGGTGGTGGCTTCCTTCTCAGCAAGAGGGCCAAATGGATTAAACCCTGAAATTCTAAAACCAGACTTAATCGCACCAGGGGTTAACATTCTCGCCGCCTGGACCGACGCCGTCGGTCCAACCGGTTTGGACTTCGATACAAGAAAAACAGAGTTCAACATCTTGTCTGGTACATCAATGGCGTGTCCTCATGTAAGTGGCGCCGCTGCTCTGTTGAAGTCAGCTCACCCAGATTGGAGTCCAGCGGCGTTAAGATCCGCCATGATGACCACCGCAAGTACCACCGACAACCGACGACAGCCGATGACGGAAGAATCCACCGGAAAAGCTTCAACTCCGTACGATTTCGGTGCTGGGCATGTAAATTTGGGTCTAGCAATGGACCCGGGTTTAGTCTACGACATTACAAACACGGATTATGTCAATTTCTTGTGCTCAATCGGATACGGACCGAAGATGATTCAAGTGATAACAAGAACGCCGGTAACCTGTCCGGCGAAAAAACCATTGCCGGAAAATCTCAATTACCCATCAATCGTTGCAGTATTCTCCAGTCTATCAAAAGGGTGGTCGACAAAGTCGTTTATCCGAACAGTGACGAACGTGGGTCCGGCAAATTCAGTGTACCGTGCCAAAATCGAAGCTCCAAAAGGGGTAACGGTGAAAGTAAAGCCTTCAAAGCTCGTGTTCTCAGCGGCGATGAAGAAACAGAGCTTCGTTGTAGCAGTGTCAGCCGACAACCAGAATCTAGCACTGGGCGACGTGGGCGCTGTTTTTGGTTGGGTTTCTTGGTCGGATGGAAAGCATGTGGTCCGAAGCCCACTCGTAGTAACCCAATTAGAGCCGTTGTAA 2313 51.71 MAAYLSPLFFFFLLIVHRLTVSADSPLKKTFIFRVDRFSKPSVFPTHYHWYTSEFAESHKILHVYDTVFHGFSATLTQQQVDSIGKHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPIPRRWKGVCETGTKFTARNCNRKIVGARFFSKGHEAGSNAAGPIIGINDTIEFRSPRDADGHGTHTASTAAGRHAFQASLEGFASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGVSSPYYLDPIAIGAYGAASRGIFVSSSGGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPAVVTLGNGRRISGVSLYAGAPLNATMFPLVYPGKSGVLSVSLCMDNSLDPKVVAGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDSMKAYASSSANPTATIAFQGTIIGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDTRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASTTDNRRQPMTEESTGKASTPYDFGAGHVNLGLAMDPGLVYDITNTDYVNFLCSIGYGPKMIQVITRTPVTCPAKKPLPENLNYPSIVAVFSSLSKGWSTKSFIRTVTNVGPANSVYRAKIEAPKGVTVKVKPSKLVFSAAMKKQSFVVAVSADNQNLALGDVGAVFGWVSWSDGKHVVRSPLVVTQLEPL 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3568839 3571151 - CmaCh20G007570.1 Cma20g00757 316571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g00757 770 SUPERFAMILY Protease propeptides/inhibitors 47 98 - -
Cma20g00757 770 Pfam PA domain 375 460 IPR003137 -
Cma20g00757 770 MobiDBLite consensus disorder prediction 578 598 - -
Cma20g00757 770 Pfam Peptidase inhibitor I9 45 102 IPR010259 -
Cma20g00757 770 Gene3D - 343 482 - -
Cma20g00757 770 CDD PA_subtilisin_like 349 475 - -
Cma20g00757 770 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Cma20g00757 770 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Cma20g00757 770 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Cma20g00757 770 Pfam Fibronectin type-III domain 660 764 IPR041469 -
Cma20g00757 770 Pfam Subtilase family 125 586 IPR000209 GO:0006508|GO:0008236
Cma20g00757 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 19 764 - -
Cma20g00757 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 102 IPR037045 -
Cma20g00757 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 764 IPR045051 -
Cma20g00757 770 MobiDBLite consensus disorder prediction 578 597 - -
Cma20g00757 770 CDD Peptidases_S8_3 100 580 IPR034197 -
Cma20g00757 770 ProSiteProfiles Serine proteases, subtilase domain profile. 100 614 - -
Cma20g00757 770 SUPERFAMILY Subtilisin-like 101 618 IPR036852 GO:0004252|GO:0006508
Cma20g00757 770 Gene3D Peptidase S8/S53 domain 127 627 IPR036852 GO:0004252|GO:0006508
Cma20g00757 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Cma20g00757 770 Gene3D - 631 767 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00247 Cma20g00757 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00827 Cma-Chr8:5012638 Cma20g00757 Cma-Chr20:3568839 0 dispersed
Cma16g00169 Cma-Chr16:739332 Cma20g00757 Cma-Chr20:3568839 0 dispersed
Cma17g00657 Cma-Chr17:5523236 Cma20g00757 Cma-Chr20:3568839 0 dispersed
Cma17g00681 Cma-Chr17:5701933 Cma20g00757 Cma-Chr20:3568839 0 dispersed
Cma05g00140 Cma-Chr5:625072 Cma20g00757 Cma-Chr20:3568839 1.57E-178 transposed
Cma02g00247 Cma-Chr2:1104197 Cma20g00757 Cma-Chr20:3568839 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g00757 - - csv:101217844 1418.68