Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g00761 ATGGGGTCTTTGAAGCTGCCGCCTTCAACGACGGTGCTGAAATGGTTGGGATTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGCAACAATTACACCTTTTCCAACTACTCCGACGTCCTTAAGTCTCTGATGAATCTCACCCAACTTCAGCTCAATAATCTCTCTGTCGCGAAAGACGTCGGTAAAGCCTTTGGCTTACTCGCCGGAATCGCCTGTGATCGTTTCCCCACGTGGGTCATCTTGCTCATTGGATCTTTGGAAGGCCTTCTTGGCTATGGCGCTCAGTGGCTCGTCGTTAGCCAGAGGATTTCTCCGCTTCCTTATTGGCAGATGTGCATTTTCTTGTGTATGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGTTGGTGACATGTATCAGAAACTTCCGGAAGAATCGCGGCCCTGTTTCCGGCATACTTAAAGGCTACGTTGGTCTCAGCACCGCGATTTTCACCGATCTCTGTACTGCTCTGTTTTCCAACGACCCTTCTTCCTTCCTCGTCATGCTCTCCGTTGTCCCCTTCGCCGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCGACAACCGCCGCCGACACCCAGGAGGAATCCAACTTCTTCGCCATCTTCAACGCTCTAGCCGTCATCGTCGCCGTCTATCTCTTGTGCTTCGATTTCATAAAAAACTTCGGCACCGTCGTCTCCCAATTGTTCTCCGTCGGGTTACTAATTCTCCTCGGATCCCCTTTGATCATTCCGATGTACTCGTTTTTCAAGAATTGCCACTCGAATTCAGCCCAATCGGATTTGGAGACGCAAACAGAGGAGCCGCTGTTGAAGGAAGAAGCCACCGTTGCCGCTCCGGTAAAGGAGGAAATAACAGAGGAGGAGCAGAAACGGCCAGTGATCGGAGAAGAACACACGATTATTCAGGCGGTGAAAACCATTGATTTCTGGGTATTGTTCATATCGTTCCTATGTGGAGTTGGGACCGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTAGCTCTGGGCTACGCCGATGTCTCCATGTTCGTCTCTCTCATAAGCATTTGGGGCTTTTTCGGCCGGATCCTCTCCGGTTCCCTCTCCGAGCATTTCCTCAAGAAATTGGGCACACCAAGACCCTTATGGAATGCAGCATCTCAAATTCTAATGACAATTGGCTACATTTTGATGGCGATGGCAATGCCGGGGTCTCTCTACATTGGCTCGGTCATAGTCGGGATCTGTTACGGTATTCGTCTCTCAATCACCGTCCCCACAGCCTCGGAGCTCTTTGGCCTCAAATACTATGGTCTCATCTACAACATTTTGATCTTGAACCTCCCAATCGGGTCGTTCCTCTTCTCTGGGCTTCTCGCGGGATTCCTCTACGACATGGAGGCAACCCCAACGGAGGGCGGGGGGAACACGTGCATCGGCGGGCATTGCTATAGAATTGTGTTTGTTGTGATGGCGTTGGCTTGTGGGATTGGGTTGGGTTTGGACATTTGGTTGGCGTATAGGACCAAGGGGCTTTATTCTAAGCTGAAAGGTAACAAGAGATCAAAGAAGGGAAGCAGCGATAATAGCTCGTTGAGTTGA 1632 50.98 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDVLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSNDPSSFLVMLSVVPFAVCLFAMFFLREIPPPTTAADTQEESNFFAIFNALAVIVAVYLLCFDFIKNFGTVVSQLFSVGLLILLGSPLIIPMYSFFKNCHSNSAQSDLETQTEEPLLKEEATVAAPVKEEITEEEQKRPVIGEEHTIIQAVKTIDFWVLFISFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLISIWGFFGRILSGSLSEHFLKKLGTPRPLWNAASQILMTIGYILMAMAMPGSLYIGSVIVGICYGIRLSITVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFVVMALACGIGLGLDIWLAYRTKGLYSKLKGNKRSKKGSSDNSSLS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3590690 3592595 + CmaCh20G007610.1 Cma20g00761 316575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g00761 543 CDD MFS_Mch1p_like 13 509 - -
Cma20g00761 543 SUPERFAMILY MFS general substrate transporter 14 521 IPR036259 -
Cma20g00761 543 Pfam Nodulin-like 14 260 IPR010658 -
Cma20g00761 543 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 535 - -
Cma20g00761 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 535 - -
Cma20g00761 543 Gene3D MFS general substrate transporter like domains 10 211 IPR036259 -
Cma20g00761 543 Gene3D MFS general substrate transporter like domains 320 536 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00243 Cma20g00761 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00164 Cma-Chr1:741024 Cma20g00761 Cma-Chr20:3590690 4.52E-48 dispersed
Cma15g00074 Cma-Chr15:358409 Cma20g00761 Cma-Chr20:3590690 3.62E-114 dispersed
Cma20g00761 Cma-Chr20:3590690 Cma13g00226 Cma-Chr13:1767532 1.14E-96 dispersed
Cma11g01388 Cma-Chr11:9145498 Cma20g00761 Cma-Chr20:3590690 0 wgd
Cma02g00243 Cma-Chr2:1081025 Cma20g00761 Cma-Chr20:3590690 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g00761 - - cmos:111448555 986.482