Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g00766 ATGGCGGCAACTTTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTTCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTATAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGGAGGAGGAGGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACACCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGCGAAGAGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCGGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGGGAGAACGGTGGTGGGGCTCATTCTGATAATTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAGGGCCGAGAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGAAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAATTGA 1272 53.38 MAATLSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPIMGNGFERRERGGGGGGGFFDSQSSKADESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWGRKSEGPKGRIGENGGGAHSDNWGRKFEGARGGFGENGGGADSDNWGKKSEGVRGGIGERPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIKDTVERAERFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGEN 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3618353 3620899 - CmaCh20G007660.1 Cma20g00766 316580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g00766 423 MobiDBLite consensus disorder prediction 20 339 - -
Cma20g00766 423 MobiDBLite consensus disorder prediction 117 135 - -
Cma20g00766 423 MobiDBLite consensus disorder prediction 136 162 - -
Cma20g00766 423 MobiDBLite consensus disorder prediction 371 423 - -
Cma20g00766 423 MobiDBLite consensus disorder prediction 383 398 - -
Cma20g00766 423 Pfam Plant specific eukaryotic initiation factor 4B 7 242 IPR010433 GO:0003743
Cma20g00766 423 Pfam Plant specific eukaryotic initiation factor 4B 245 378 IPR010433 GO:0003743
Cma20g00766 423 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 245 - -
Cma20g00766 423 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 260 407 - -
Cma20g00766 423 MobiDBLite consensus disorder prediction 20 34 - -
Cma20g00766 423 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 260 407 IPR010433 GO:0003743
Cma20g00766 423 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 245 IPR010433 GO:0003743
Cma20g00766 423 MobiDBLite consensus disorder prediction 189 209 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma02g00325 Cma20g00766 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00048 Cma-Chr5:192132 Cma20g00766 Cma-Chr20:3618353 1.44E-25 dispersed
Cma20g00766 Cma-Chr20:3618353 Cma12g00038 Cma-Chr12:142906 4.56E-23 dispersed
Cma11g01390 Cma-Chr11:9161690 Cma20g00766 Cma-Chr20:3618353 1.73E-12 wgd
Cma02g00325 Cma-Chr2:1568498 Cma20g00766 Cma-Chr20:3618353 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g00766 - - csv:101214573 594.734