Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g00881 ATGCCATTAGAGTTTTCTCCAAATCCCAACACAGAAATTCCCGGGAGAAGGATGATGCAGGGACTTCACCATCAGCAGCAGCAACTAGCGGCGCTTCTCAACGTAGCTTTGCGGAAGGATGATCCTAATGCCACTACCTCAAGTTCCATTTCCACCGGTGCTGCTTCCGACGAGGACGACTCTGCTAGAATTGCAGCTATCAATTCAATCCATCGCGCCATTGTTTATCCTCCTAATTCGCTTCTCGTAACTCACTCCTCCACTTTTCTTTCCCAGGGCTTCTCTCAGCTTCTATCTGATAAGTCATACCCAGTGAGACAGGCAGCAGCCATTGCATATGGGGCTCTCTGTGCTGTCTCATGTTCAATCGCGGCATCACCAAATGGAAGGCAGAATAGTGTACTACTTGGGACTTTGGTCGATCGATTCATTGGTTGGGCATTGCCATTGCTTAGCCATGTCACTGCAGGTGATGCAACCACCAAATTGGCATTGGAGGGATTACAAGAGTTCATTAACATTGGAGAAGCTGGTGCTGTGGAGAGATATGCTTTGCCAATTCTTAAAGCATGCCAAGTACTTCTTGAGGATGAGAGAACCCCCTTGTCTTTATTACATGGACTCTTAGGAGTTTTAACATTGATTTCTCTGAAGTTTTCTAGATGTTTCCAACCTCATTTTCTTGATATCGTTGATCTACTTCTAGGTTGGGCATTAGTTCCAGATCTAACCGATTCAGATAGGCACATCATAATGGACAGTTTCTTACAGTTTCAGAAGCACTGGGTGGGTAATTTGCAGTTTTCTCTGGGTTTATTGTCAAAGTTCTTGGGTGACATGGATGTATTACTTCAAGATGGGAGTCCTGGGACACCACAACAATTCCGTAGATTACTTGCATTACTTTCTTGTTTCTCAACAATTCTTCGGTCTACAGCTTCTGGGTTGTTGGAATTGAACCTTCTTGAGCAAATAAGTGAATCTCTTTCGAGAATGCTTCCCCAGTTGTTAGGATGTTTATCCATGGTTGGACGTAAATTTGGATGGTTGGAGTGGATTGAGAATTTGTGGAAGTGCTTGACTCTTTTGGCAGAAATATTACGTGAACGTTTTTCCACCTTTTATCCACTTGCGATCGATATCCTATTCCAAAATTTGGAAATGACCAGAGCTAACCATGTTGTGAGAGGACATAAGATTACGTTTCTTCAAGTTCATGGTGTCTTAAAAACTAATCTTCAGTTATTGTCCCTTCAAAAACTTGGACTGCTGCCATCGTCTGTGCACAGAATATTGCAATTTGATGCACCAATATCTCAGCTTAGACTGCATCCAAATCATTTGGTAACAGGAAGTTCTGCTGCCACTTATATATTCTTGCTCCAACATGGGAATAATGAAGTTGTTGAACAAACAGTGACATTATTAACTGAAGAGTTAGAAGTGTTCAAGGGCTTGTTAGAAAAAGGTTTAGATCAAGGAAATATCAATGGTATTCTCGAATCTCAATTTTATTCGAAAATGGATTTGTTTGCCCTCATTAAATTTGATTTGAGAGCCTTATTGACATGTACTATCTCTAGTGGAACTATTGGTTTGATAGGCCAAGAAAATGTTGCTTTGACATGTTTAAGAAGGTCAGAAAGATTGATTTCCTTCATTATGAAAAAATTGAATCCTTTTGACTTTCCAATTCAGGCTTATGTGGAATTGCAAGCTGCTATCCTCAATACATTGGACAGCTTGACCACAACTGAATTATTTAGTAAGTGTTCTTTAAGGAAATTGAGTAGCGAGAGCCATTTTCTGGATGCAGGTGAAGAGATAGATGAAACATTTCTAAATAAGGACCATTCAGCTATTATTATTGAGCAACTAACAAAATACAATATGCTCTTCTCCAAAGCCCTTCATAAAGCTTCTCCTCTAACAGTTAAAATAACAACCCTGGGTTGGATTCAGAGATTTTGTGAGAATGTCGTTACTATTTTTAAGAATGACACAACATATGCCAACTTTTTTGAAGCATTTGGATATTTCGGAGTCATAGGAAACTTGATTTTCATGGTAATTGATGCTGCATCTGACCGGGAACCTAAGGTGAGATCTAATGCAGCTTCAGTATTGGAGCTGCTTCTGCAAGCAAAAATTGTTCATCCCATATACTTTTATCCCATTGCTGATATAGTCCTGGAGAAACTTGGTGATCCAGATAATGATATAAAAAACTCATTCGTGAGATTGCTTTCTCATATCTTGCCTACGGCACTTTATGCCTGTGGTCAATATGACCTTGGATCATATCCTGCTTCCAGGCTACATCTTTTGAGGTCGGATCATAAATCTAGCCTGCATTGGAAACAAGTATTTGCCTTGAAGCAGCTGCCTCAGCAAATTCATTTTCAGCAACTTATTTCCATCTTGAGCTACATATCACAAAGATGGAAAGTTCCTGTTGCATCATGGACCCAACGGCTCATCCATAGATGTGGGAGATTGAAGGATATTGATTCGAGTCAAAGTGAGGAGACAGGGAACTTTGGTGCAAACGGTTTATGGTTGGATCTCAAGGTGGATGATGAGTTTCTTAATGGCAATTGCTCAGTTAATTGTGTAGCTGGAGTGTGGTGGGCCATCCATGAAGCAGCTAGATATTGTATTACTCTGCGTTTACGAACAAACCTTGGTGGGCCTACACAGACCTTTGCAGCACTAGAGCGGATGCTTTTAGACATAGCGCACTTGCTACAGCTTGATAATGAACATAGTGATGGGAATTTGACAATGGTTGGGGCTTCTGGAGCACGTTTATTGCCAATGAGGTTGTTATTGGATTTTGTTGAGGCCTTAAAGAAAAATGTTTATAATGCATATGAGGGGTCTGCAGTCTTATCACCTGCTACTCGTCAAAGTTCTTTGTTTTTTCGAGCAAACAAGAAAGTCTGTGAGGAGTGGTTTTCACGTATGTGTGAGCCAATGATGAATGCTGGATTGGCACTTCAAAGCCAATATGCTGCAATCCAATACTGTACTCTGCGTTTGAAGGAGTTGAAGAATCTTGTAGGTGAGAACATTCACAACAACAAGCATAAATTTACCAGAGATATCTTAAGGGTTTTGAGGCATATGACTCTGGCTCTTTGTAAAAGTCATGAAGCAGAAGCTTTGGTTGGTCTCCAGAAATGGGTTGAAATGACATTCTCTTCCGTCTTTCTTGAGGAAAACCAGAGTCTTGATAACTTTGGTATACTAGGACCCTTTTCATGGATTACAGGGCTAGTCTATCAGGCAAGAGGTCAATACGAAAAAGCAGCTGCTCACTTTATCCACTTGTTGCAGACTGAAGAGTCACTCGCTTCTATGGGTTCTGATGGTATACAGTTCACCATTGCTCGTATTATTGAGGGGTATACAGCTATGGCTGATTGGAAATCTCTGGAATCATGGTTATTGGAGTTGCAATCTCTTCGTTCTAAACATGCTGGGAAGAGCTACTCTGGTGCTCTAACTACAGCTGGCAATGAAATAAATGCAATCCATGCATTGGCACACTTTGATGAAGGAGATTATCAGGCATCATGGGCGTGTCTTGGTTTGACACCTAAGAGTAGCAGTGAGCTAACTCTAGATCCCAAGTTGGCTTTGCAGAGAAGTGAGCAGATGCTTTTACAAGCACTGCTTTTCCATAATGAGGGAAGGATGGAAAAGGTGTCCCAAGAAATCCAGAAGGCAAGGGGAATGCTGGAGGAAACGTTGTCTATCTTGCCTCTGGATGGGTTGGAAGAGGCAGCTGCATTTGCTACTCAATTACATAGCATTTCTGCATTTGAAGAAGGTTACAAGCTTACAGGCTGTGAAAACAAACACAAACAGTTAAATTCAATATTGAGTGTTTACGTCCAGTCAGTGCAATCTTCTTTTTGTAGAGTTAATCAAGATTGCAACTCATGGTTAAAAGTTCTTCGTGTTTATCGAGTGATCTCACCAACTTCTCCAATCACATTGAAACTCTGTATTAATTTATTGAGTTTGGCTCGTAAACAGAAAAACCTGATGTTGGCAAATAATTTAAACAATTATATTCACGATCATATGTCAGATTGTTTTGATGAAAGGCATTGTCAATTTCTCCTCTCAAGTTTGCAGTATGAGAGAATTTTGTTAATGCAAGCTGACAACAAGTTTGAAGATGCTTTCACAAATATTTGGTCCTTTGTACATCCTCACATCATTTCTTTCAACTCAATTGAGTCAAACTTCGATGATGGTATTCTGAAAGCAAAAGCATGCTTAAAACTTTCTCATTGGTTAAAACAGGATTTAAAAGCTTTGAACTTGGATAATGTTATACCTAAGATGATTGCTGAGTTTAATGTCACAGATAAATCATCTGGCAAAGGTGAGTTCTCCATCTGTAATGAGAACTTACACTCTGGGTCAAGTATAGAACTTATCACTGAGGAGATGGTAGGTACGATGACTAAATTGTCCACTCGTCTTTGCCCTACATTTGGCAAGTCATGGATTTCTTATGCATCTTGGTGCTTTAGTCAAGCTGAAAGTTCTCTCTGTGCTTCATGTGGAACTTCTCTCCGCTCATGCTTGTTTTCTTCTATATTAGATCCTGAAGTTCTTCCTGAGAAAGATAAATTAACTAAAGATGAAATCATCAGAGTAGAACACCTGATTTATCTTCTTGTGCAGAAAGATTATGAAGCAAAAAGTGTTAATGATGAGCTAAGAGAATGGAACTCTGAGACTGCAGAGGATTTGAAACTTGGTAGCACCGTCAAGGCCATGTTGCAGCAAGTAATAAATATCATTGAGGCTGCAGCTGGGTTGTCAAATGCGGAAAATCCTGGGAATGAATGTCTTACTGATGTATTTACCTCCCAGTTAAAGTTATTCTTTCAGCATGCCATTACTGACCTAGATGACTCTAGTGCAGTACCCATAATTCAGGATTTGGTAGATGTTTGGAGGACCTTGAGGAGTAGAAGAGTGTCTCTCTTTGGTCATGCTGCTCATGGCTTTATACAATATCTTTTGTATTCAAGTATAAAAGCTTGCAATGGTCAGCTGGCGGGCTATGAGTGTAAGTCAATAAAACAGAAGTCCGGAAAATACACACTGAGGGCCACGTTGTACGTCCTACATATTCTTCTCAATTATGGAGCTGAGTTAAAAGATTCTCTTGAGCCTGCTCTATCAACAGTCCCACTCTCTCCATGGCAGGAAGTGACACCACAGTTATTTGCTCGCCTGAGTTCCCATCCTGAGAAAATTGTGAGGAAACAGTTGGAGGGATTAGTGATGATGTTGGCTAAGCGGTCCCCCTGGTCTGTAGTATACCCGACACTGGTTGATGTAAATTCTTATGAAGAGAAGCCTTCGGAGGAGCTTCAGCACATACTTGGTTCTCTGAAAGAACATTATCCAAGATTGATAGATGATGTTCAGTTGATGATAAAAGAGCTGGAAAATGAAGAAGCTGCTCGAATTGCTGCAAATGTCACTCTCAGCCAGAGTGAGAAAAACAAGATAAATGCTGCTAAGTACTCAGCCATGATGGCCCCCATTGTAGTGGCTTTGGAGCGTCGGTTAGCTTCAACATCTCGAAAACCTGAAACACCCCATGAAACCTGGTTTCATGAAGAGTATGAAGAACAGCTTAAGTCAGCTATTTTTACCTTCAAGAATCCTCCAGCTTCTGCTGCTGCACTTTTTGATGTATGGCGGCCATTTGATAATATTGCAGCATCTTTGGCATCTTATCAGAGAAAGTCATCAATTTCTTTAAGAGAAGTGGCACCTAAGTTAATTTTGTTATCATCATCTGATGTCCCAATGCCTGGTTTTGAGAAGCATGTTATATATTCTGAAGCTGACAGAAGCGTTGGCTCTAATATTAAGGGAACTGTTACAATTGGTTCTTTCTCCGAGCAAGTTACTATCTTATCCACCAAAACAAAACCTAAAAAGCTTGTTATACTGGGTTCTGATGGTGAAACCTACACTTATCTCTTAAAAGGTAGAGAGGATCTGCGTCTTGATGCTAGAATCATGCAAATGTTGCAAGCTATCAATAGTTTTTTGTATTCATCTCATTCAACTTATAGTCAATCTCTCTCCGTTCGCTATTATTCTGTAACTCCAATTAGTGGTAGAGCTGGTCTCATCCAATGGGTGAACAATGTCATGAGTGTATATACTGTATTCAAGTCATGGCAACACCGGATCCAGGTGGCACAACTCTCAGCAGTTGGTGCTAGCAATTTAAAAAATTCTGTTCCTCCACAGCTTCCACGTCCAAGCGATATGTTTTATGGTAAAATCATACCGGCACTTAAAGAGAAAGGCATAAGGAGAGTGATTTCACGCAGAGATTGGCCCCATGAAGTCAAACGTAAAGTTCTTTTGGATCTTATGAAGGAGGTTCCGAGACAACTTCTTTATCAAGAACTATGGTGTGCTAGTGAAGGATTCAAAGCTTTCAGTTTGAAATTAAAAAGGTATGCAGGAAGTGTTGCAGCAATGAGTATGGTGGGACACATCTTAGGCTTAGGCGATAGACATTTGGATAATATTCTTATGGATTTCTCCACTGGAGATGTTGTACATATTGACTATAATGTTTGTTTTGACAAAGGGCAGAAACTGAAAGTTCCAGAGATTGTTCCTTTTCGTCTCACCCAAACTATGGAAGCAGCTTTAGGACTGACAGGAATAGAAGGGACCTTCAGAGCAAACTGTGAGGCTGTGCTGGAAGTTCTGAGAAAGAACAAAGACATACTCCTAATGCTGCTAGAAGTTTTTGTGTGGGATCCTCTTGTGGAATGGACGCGTGGTGATTTCCATGATGATGCCACTATAGGTGGCGAAGAAAGAAGAGGCATGGAGTTGGCTGTTAGCTTGAGTTTATTTGCATCTCGTGTGCAGGAAATTCGTGTCCCCTTGCAGGAGCATCATGATCTTTTATTGGCTACCCTACCTACTGCTGAGTCTTCTCTTGAGGGGTTTGCGAATGTCCTAAATCACTATGAGCTTGCCTCTGCGCTCTTTTATCAAGCTGAACAAGAAAGGTCAAACCTAGTTATGCGTGAAACATCAGCTAAGTCAGTTGTTGCGGATGCAACATCTAATGCAGAGAAAGTTCATGCATTATTTGAAATGCAGGCTCGTGAGCTTGCTCAAGCTAAGGCTATTGTTTCTGAGAAAGCTCAAGAAGCTTCAACTTGGATTGACCAACATGGAAGAATCCTTGATAGTTTAAGGAACAATATGATCCCAGAAGTAGATACTTGTTTGAATCTGAGAGCAGTTGGAGAAGCTTTTTCACTTATATCTGCAGTCACGGTGGCTGGAGTTCCAATGACAGTTGTTCCTGAGCCTACCCAAGTGCAATGCCATGATATAGATAGGGAAATTTCTCAGCATATAGCTGCACTAAGCGATGGACTTTCTTCTGCTGTAACTACAATTCAAGTTTATTCTGTTTCTTTGCAGAGATTTCTGCCTCTAAACTATGGAACAACTAGTGTAGTTCATGGCTGGGCTCAGACTTTACAACTATCGAAGAATGCCCTCTCCTCTGATATTATTTCACTTGCAAGGAGGCAGGCTACTGAACTTATTATAAAAGTGAACGCTAATAATGATTCCATACAAGTCAATCATGATAATATGTGTGTTCAAGTGGAGAAATACGCTAAGGAAATTGCAAAAATTGAAGAAGAGTGTACTGAGCTTATGACCTCTATTGGTACAGAAACTGAATTGAAAGCCAAAGATCGCCTTCTATCAACTTTTGTGAAATATATGGTGGCTGCTGGCCTTGTAAGGAAAGAAGCTATTTCATCTTTCCAATTGGGACGGCTTACACATGATGGAAAAAAGGACATAAACATGCAGGTGGAGCTTGGGGAAGCAAAGGAAAAAAAGGAAAAGCTACTATCTAGTATCAATGTTGCTCTGGATATTCTATATTGTGAGGTTAGAGGAAAATTGCTGGACACTTTTAATGGTATGAGTGATGAGAGACTAGCGAATACAACTTCACCTCATGATTTTAATGTTGTTTTCTCCAATCTAGAAGAGCAAGTGGAGAAATGTGTGCTTTTGACAGAGTTTCATACTGAATTACTGGACTTGATTGATAATAAAGTGCTGAGCATTGAAAACAAAAATAAAACTCGGCACAGGAACCATTCTCATAGAAACTGGACTTCCACTTTTAATGTCATGCTGTCATCTTTTAAAGGCCTGATAGGGAAAATGACTGAGGCTGTTCTACCTGATATAATTAGATCTGCTATTTCGGTGAATTCAGAAGTTATGGATGCATTTGGATTGGTCTCACAAATTCGGGGATCCATTGATACAGCACTAGAACAGTTTCTAGAGGTTCAATTAGAGAAGGCTTCTTTAGTTGAATTGGAAAAAAGTTATTTTATCAATGTTGGTCTCATTACGGAGCAGCAATTAGCTCTTGAGGAAGCTGCTGTAAAGGGAAGGGATCATCTTTCTTGGGAAGAGGCCGAGGAGCTTGCTTCAGAGGAGGAAGCTTGCAGGGCAGAACTGCATCAACTGCATCAAACATGGAACCAGAGAGATGCACGCAGCTCGTCTCTTGCAAAGAGGGAAGCAAATTTAGTAAATGCATTGGCTTCATCAGAATGCCAGTTTCAATCTCTCATCAGTGCTGCAGTGGACAACGAGGCTCTTACTAAAGGCAACACCTTATTGGCCAAATTAGTTGAACCTTTTTCTGAATTGGAATCTATTGATGAAGTGTGGTCGTCCACTGGAATTTTTTTTGCATCTAACTCAAATGGGATTCCTAAATTGTCAGATGTGGTGAGTTCTGGGTACCCAATATCTGAATATATTTGGAGATTTGGTGGCCTGTTGAGCAGTCATTCTTTCTTTATTTGGAAAATTTGTGTTGTGGATTCTTTCCTCGACTCATGCATACATGAAATAGCTTCAGCCGTGGATCAAAATTTTGGATTTGATCAGCTCTTTAATGTTATGAAGAAAAAGCTTGAGCTTCAGCTTCAAGAATATATTTTTAGGTACCTTAAAGAACGGGGTGTTCCTACAATGTTGGCTTGGTTAGATGAAGAAAGGGAACATTTAAAGCAACTGGAGGCAAGAAAAGAAAATTTTCATGAACCCCACGATCAACAAAAGAATGATTTTGAATCTATTGAGAGGATCAGGTATATGCTTCAGGAACATTGTAATGTGCATGAAACTGCTAGAGCAGCAAGGTCTGCAGCTTCACTTATGAGAAGGCAGATGAATGAGCTGAAGGAGACTCTTCAGAAGACTAGTCTGGAAATTATTCAAATGGAGTGGTTACATGACATGGATTTGACTCCTTCACAATTTAATCGGGCAACCTTGCAAAAATTTCTTTCTGTAGAGGATAGTTTATACCCCATTATTCTAGACCTTAGCCGATCTGAATTACTGGGAAGTTTGCGATCTGCTGCTTCAAGGATAGCCAAGTCAATTGAAGGCCTTGAAGCTTGTGAGCGAGGTTCTCTTACAGCTGAAGCACAGCTGGAGAGGGCAATGGGGTGGGCTTGTGGTGGCCCAAATACTGGCTCGGTGATAAATACTTCTAAATCTTCAGGGATTCCTCCTCAATTCCATGACCATATCTTGAGGCGGAGGCAGCTGTTATGGGAAACTAGAGAAAAAGCATCAGACATTATTAAGATTTGCATGTCTATATTGGAATTTGAAGCATCCAGAGATGGCATCCTTCAATTTCCTGGAGATCATGCTTTTAGTACAGACAGTGATAGCAGGGCATGGCAGCAAGCTTACTTGAACGCAATAACAAGATTCGATGTTTCTTATCACTCCTTTGCACGTACTGAACAAGAATGGAAGCTTGCAGAAAGAAGCATGGAGGCTGCCTCAAACGAATTATACTCTGCAACCAATAATCTTCGCATTGCCTCTCTTAAAGTGAAATCTGCTTCAGGTGATTTACAAAGCACTCTTCTCAGTATGAGAGATTGCGCATATGAAGCCAGTGTTTCACTCTCAGCATTTGGTAATGTCTCAAGGAACCACACTGCTTTGACCTCTGAGTGCGGTTCCATGCTTGAAGAGGTACTAGCAATAACTGAAGATCTGCATGATGTTCATAATTTGGGAAAGGAGGCTGCTGTAATTCACCGTCGTCTTATTGAAGACATTGCGAAAGCAAATTCTGTCCTTCTCCCCCTGGAGGCAATGTTGTCCAAGGATGTTGCGACCATGATTGATGCTATGGCAAGAGAAAGAGAGATCAAGATGGAAATATCACCTATACATGGACAAGCTATATATCAGTCCTATTGTTTGAGAATTAGGGAGGCCTATCAGATGTTAAAGCCCTTGGTTCCTTCTCTTACATTGTCTGTGAAGGGTCTGTATTCCATGTTTACCAGGCTAGCTCGAACTGCAAGTCTCCATGCTGGCAATCTTCATAAAGCCCTTGAAGGACTAGGAGAAAGCCAGGAAATAAAGTCAGAGGGGATTCACATAACTAGGCCTGAGTTCAATCGTGAAGTGGATGCAGCTGACTTTGAAAAGGAGAGAGAAAGCCTCTCCTTGTCTGATAGTGGGAGCAGCAAAGGTATCCCTGATGTTACCAGACTTTCTTTACAAGATAAAGAATGGCTATCTCCACCTGATAGTTTCTGCAGCAGCAGCTCTGGATCTGGTCTTACCTCTGGTAGCTTTCCAGACAGCTCCAATGACCTAACAGAGGAGATGGATCAACATTATAATAGTTATAGCAACAGAGAAGCTAGAGTTTGTCCAAAAATTACCTCATTTTCTCAAACTGACACTGGAAAAATCTTACCTTTAGAAGAGTCAGAATCAAAATCCACTGATGACAGTGAAACCTTTTTTAGGAAGTTAACAACCAATGAATTAAATGGAGGTATAAAAATTGTTGCAACACCAGCTGATGAATCTATTGAAGTTCCTACTATTGCATCGTATTCATTGACTGAGACTGTTGAAAAGCTGGGGGAGGAAAGTGGTGTAATCTCATCAGATAAGAGGTTGGAAGATGAAAATCAAGAGGCTCCTCCTGCTCAGAAGGCTGCTTGGAGTCGTGCAAGCAGGGGTAGAAACGCCTATGCAATGTCTGTTTTACGGCGTGTTGAGATGAAACTCAATGGACTAGACAATGTTGATAACAGGGAACTTAGCATTGCTGAGCAAGTGGATTATCTACTTAAGCAAGCAACGAGTGTCGACAACTTGTGTAACATGTTGGACTCCATGGATTTGAAATTTGATGACCAAGGAATCTTGGATGTCATGCCTGTTCTGAGG 11349 40.72 MPLEFSPNPNTEIPGRRMMQGLHHQQQQLAALLNVALRKDDPNATTSSSISTGAASDEDDSARIAAINSIHRAIVYPPNSLLVTHSSTFLSQGFSQLLSDKSYPVRQAAAIAYGALCAVSCSIAASPNGRQNSVLLGTLVDRFIGWALPLLSHVTAGDATTKLALEGLQEFINIGEAGAVERYALPILKACQVLLEDERTPLSLLHGLLGVLTLISLKFSRCFQPHFLDIVDLLLGWALVPDLTDSDRHIIMDSFLQFQKHWVGNLQFSLGLLSKFLGDMDVLLQDGSPGTPQQFRRLLALLSCFSTILRSTASGLLELNLLEQISESLSRMLPQLLGCLSMVGRKFGWLEWIENLWKCLTLLAEILRERFSTFYPLAIDILFQNLEMTRANHVVRGHKITFLQVHGVLKTNLQLLSLQKLGLLPSSVHRILQFDAPISQLRLHPNHLVTGSSAATYIFLLQHGNNEVVEQTVTLLTEELEVFKGLLEKGLDQGNINGILESQFYSKMDLFALIKFDLRALLTCTISSGTIGLIGQENVALTCLRRSERLISFIMKKLNPFDFPIQAYVELQAAILNTLDSLTTTELFSKCSLRKLSSESHFLDAGEEIDETFLNKDHSAIIIEQLTKYNMLFSKALHKASPLTVKITTLGWIQRFCENVVTIFKNDTTYANFFEAFGYFGVIGNLIFMVIDAASDREPKVRSNAASVLELLLQAKIVHPIYFYPIADIVLEKLGDPDNDIKNSFVRLLSHILPTALYACGQYDLGSYPASRLHLLRSDHKSSLHWKQVFALKQLPQQIHFQQLISILSYISQRWKVPVASWTQRLIHRCGRLKDIDSSQSEETGNFGANGLWLDLKVDDEFLNGNCSVNCVAGVWWAIHEAARYCITLRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEHSDGNLTMVGASGARLLPMRLLLDFVEALKKNVYNAYEGSAVLSPATRQSSLFFRANKKVCEEWFSRMCEPMMNAGLALQSQYAAIQYCTLRLKELKNLVGENIHNNKHKFTRDILRVLRHMTLALCKSHEAEALVGLQKWVEMTFSSVFLEENQSLDNFGILGPFSWITGLVYQARGQYEKAAAHFIHLLQTEESLASMGSDGIQFTIARIIEGYTAMADWKSLESWLLELQSLRSKHAGKSYSGALTTAGNEINAIHALAHFDEGDYQASWACLGLTPKSSSELTLDPKLALQRSEQMLLQALLFHNEGRMEKVSQEIQKARGMLEETLSILPLDGLEEAAAFATQLHSISAFEEGYKLTGCENKHKQLNSILSVYVQSVQSSFCRVNQDCNSWLKVLRVYRVISPTSPITLKLCINLLSLARKQKNLMLANNLNNYIHDHMSDCFDERHCQFLLSSLQYERILLMQADNKFEDAFTNIWSFVHPHIISFNSIESNFDDGILKAKACLKLSHWLKQDLKALNLDNVIPKMIAEFNVTDKSSGKGEFSICNENLHSGSSIELITEEMVGTMTKLSTRLCPTFGKSWISYASWCFSQAESSLCASCGTSLRSCLFSSILDPEVLPEKDKLTKDEIIRVEHLIYLLVQKDYEAKSVNDELREWNSETAEDLKLGSTVKAMLQQVINIIEAAAGLSNAENPGNECLTDVFTSQLKLFFQHAITDLDDSSAVPIIQDLVDVWRTLRSRRVSLFGHAAHGFIQYLLYSSIKACNGQLAGYECKSIKQKSGKYTLRATLYVLHILLNYGAELKDSLEPALSTVPLSPWQEVTPQLFARLSSHPEKIVRKQLEGLVMMLAKRSPWSVVYPTLVDVNSYEEKPSEELQHILGSLKEHYPRLIDDVQLMIKELENEEAARIAANVTLSQSEKNKINAAKYSAMMAPIVVALERRLASTSRKPETPHETWFHEEYEEQLKSAIFTFKNPPASAAALFDVWRPFDNIAASLASYQRKSSISLREVAPKLILLSSSDVPMPGFEKHVIYSEADRSVGSNIKGTVTIGSFSEQVTILSTKTKPKKLVILGSDGETYTYLLKGREDLRLDARIMQMLQAINSFLYSSHSTYSQSLSVRYYSVTPISGRAGLIQWVNNVMSVYTVFKSWQHRIQVAQLSAVGASNLKNSVPPQLPRPSDMFYGKIIPALKEKGIRRVISRRDWPHEVKRKVLLDLMKEVPRQLLYQELWCASEGFKAFSLKLKRYAGSVAAMSMVGHILGLGDRHLDNILMDFSTGDVVHIDYNVCFDKGQKLKVPEIVPFRLTQTMEAALGLTGIEGTFRANCEAVLEVLRKNKDILLMLLEVFVWDPLVEWTRGDFHDDATIGGEERRGMELAVSLSLFASRVQEIRVPLQEHHDLLLATLPTAESSLEGFANVLNHYELASALFYQAEQERSNLVMRETSAKSVVADATSNAEKVHALFEMQARELAQAKAIVSEKAQEASTWIDQHGRILDSLRNNMIPEVDTCLNLRAVGEAFSLISAVTVAGVPMTVVPEPTQVQCHDIDREISQHIAALSDGLSSAVTTIQVYSVSLQRFLPLNYGTTSVVHGWAQTLQLSKNALSSDIISLARRQATELIIKVNANNDSIQVNHDNMCVQVEKYAKEIAKIEEECTELMTSIGTETELKAKDRLLSTFVKYMVAAGLVRKEAISSFQLGRLTHDGKKDINMQVELGEAKEKKEKLLSSINVALDILYCEVRGKLLDTFNGMSDERLANTTSPHDFNVVFSNLEEQVEKCVLLTEFHTELLDLIDNKVLSIENKNKTRHRNHSHRNWTSTFNVMLSSFKGLIGKMTEAVLPDIIRSAISVNSEVMDAFGLVSQIRGSIDTALEQFLEVQLEKASLVELEKSYFINVGLITEQQLALEEAAVKGRDHLSWEEAEELASEEEACRAELHQLHQTWNQRDARSSSLAKREANLVNALASSECQFQSLISAAVDNEALTKGNTLLAKLVEPFSELESIDEVWSSTGIFFASNSNGIPKLSDVVSSGYPISEYIWRFGGLLSSHSFFIWKICVVDSFLDSCIHEIASAVDQNFGFDQLFNVMKKKLELQLQEYIFRYLKERGVPTMLAWLDEEREHLKQLEARKENFHEPHDQQKNDFESIERIRYMLQEHCNVHETARAARSAASLMRRQMNELKETLQKTSLEIIQMEWLHDMDLTPSQFNRATLQKFLSVEDSLYPIILDLSRSELLGSLRSAASRIAKSIEGLEACERGSLTAEAQLERAMGWACGGPNTGSVINTSKSSGIPPQFHDHILRRRQLLWETREKASDIIKICMSILEFEASRDGILQFPGDHAFSTDSDSRAWQQAYLNAITRFDVSYHSFARTEQEWKLAERSMEAASNELYSATNNLRIASLKVKSASGDLQSTLLSMRDCAYEASVSLSAFGNVSRNHTALTSECGSMLEEVLAITEDLHDVHNLGKEAAVIHRRLIEDIAKANSVLLPLEAMLSKDVATMIDAMAREREIKMEISPIHGQAIYQSYCLRIREAYQMLKPLVPSLTLSVKGLYSMFTRLARTASLHAGNLHKALEGLGESQEIKSEGIHITRPEFNREVDAADFEKERESLSLSDSGSSKGIPDVTRLSLQDKEWLSPPDSFCSSSSGSGLTSGSFPDSSNDLTEEMDQHYNSYSNREARVCPKITSFSQTDTGKILPLEESESKSTDDSETFFRKLTTNELNGGIKIVATPADESIEVPTIASYSLTETVEKLGEESGVISSDKRLEDENQEAPPAQKAAWSRASRGRNAYAMSVLRRVEMKLNGLDNVDNRELSIAEQVDYLLKQATSVDNLCNMLDSMDLKFDDQGILDVMPVLR 3783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4216463 4236759 - CmaCh20G008810.1 Cma20g00881 316695

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g00881 3783 Pfam Phosphatidylinositol 3- and 4-kinase 2005 2281 IPR000403 -
Cma20g00881 3783 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 69 3762 - -
Cma20g00881 3783 Gene3D - 2148 2305 IPR036940 GO:0016301
Cma20g00881 3783 Gene3D - 1933 2063 - -
Cma20g00881 3783 SUPERFAMILY Protein kinase-like (PK-like) 1941 2284 IPR011009 -
Cma20g00881 3783 Pfam Serine/threonine-protein kinase smg-1 566 1189 IPR031559 GO:0000184|GO:0004674|GO:0016310
Cma20g00881 3783 SMART pi3k_hr1_6 2006 2343 IPR000403 -
Cma20g00881 3783 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1979 2320 IPR000403 -
Cma20g00881 3783 CDD PIKKc_SMG1 1976 2282 IPR039414 GO:0000184|GO:0004674
Cma20g00881 3783 Pfam FATC domain 3740 3762 IPR003152 GO:0005515
Cma20g00881 3783 ProSiteProfiles FATC domain profile. 3738 3782 IPR003152 GO:0005515
Cma20g00881 3783 ProSiteProfiles FAT domain profile. 1168 1792 IPR014009 -
Cma20g00881 3783 Coils Coil 3087 3114 - -
Cma20g00881 3783 MobiDBLite consensus disorder prediction 3682 3708 - -
Cma20g00881 3783 MobiDBLite consensus disorder prediction 3564 3589 - -
Cma20g00881 3783 PANTHER OS03G0738200 PROTEIN 69 3762 - -
Cma20g00881 3783 Coils Coil 2559 2586 - -
Cma20g00881 3783 MobiDBLite consensus disorder prediction 3683 3698 - -
Cma20g00881 3783 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2175 2195 IPR018936 GO:0016301
Cma20g00881 3783 SUPERFAMILY ARM repeat 54 816 IPR016024 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g00881 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] - csv:101222679 6535.28
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01361 Cma-Chr11:9012553 Cma20g00881 Cma-Chr20:4216463 4.97E-50 dispersed
Cma19g00538 Cma-Chr19:6177231 Cma20g00881 Cma-Chr20:4216463 6.80E-62 dispersed
Cma20g00881 Cma-Chr20:4216463 Cma05g00014 Cma-Chr5:60526 1.06E-07 dispersed
Cma20g00881 Cma-Chr20:4216463 Cma11g00094 Cma-Chr11:460913 4.29E-32 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g525 . . . . . . . . . . . Cma20g00881 . Car20g00759 . . . . . . . . . . . . . . . . . . . . . Lsi10g00324 . Chy11g00422 . . . . . . . . . . . Cmo20g00889 . . . . . . Bhi10g02063 . . . Hepe08g1050 . . Cla09g01732 Cam09g1827 Cec09g1887 Cco09g1980 . . Cre01g0682 . Csa02g01213 . Cme11g00489
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011498 0 3 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma20g00881 Cma_Chr20 FPKM 4.10882 4.773314 3.94676 4.090579 4.923416 5.271044 4.817975 4.247923 3.337132 3.671248