Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma20g00927 | ATGGAGACGTGGTTCATCATCATCATTTCGCTCTGTTTCTGTTCCCTTCTGAACTCCATTTTTTCACACTGCCGAAGCTCCATCAACCTCCCACCAGGCCCTCCTTCCATCCCCATCTTCACTAATCTCCAATGGCTCCGCAGATCCCCTCTTCAAATCGAGTCTCTTCTCCGCACCTCCGTCGCCAAATACGGCCCCATCATCACCCTCCCCATTGGCACTCGCCCCACCGTCTTCATCGCCGACCGCTCCATCGCCCACAACGCCCTTGTCCTAAACGGTGCTCTTTTCGCCGACCGTCCAACTGCACTTCCCATCAGCAAGATCGCCTCCAGTAACCAGCATAATATCAACACCGCCTCTTATGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGGGTCAAGTCCTACGCCCGTGCTCGCAGGTGGGTTTTGGATATTCTTATTGATCGGTTCCTCTCTCACTCTCAATTGGGAGAACCCATTTTCGTTGTGGATCATTTTCAGTACGCTATGTTTTGTTTGTTGGTGTTGATGTGCTTTGGAGACAAGCTTGAGGAATCCCAGATCAAGGAAATTGAGAACGTGCAGCGTGCGATGCTGGTAAACCTTGGGCGTTTCAACGCTCTCAATTTCTGGCCCAAATTGACCAAGATTTTCCTCCAAAAGCGCTGGGAGACGTTTCATGAACTCAAGAGGAAGCGAGATGAAGTCACCATCCCTTTAATCGAAGCAAGAAGAAAGGCCATCCAAAACAGAGAAAACAGAGCAAACAGAGCAAACAGAGCCGAAGCTGAAGAAGAAAAAGAAGAATTCGTGGTGTCATATGTGGATACCCTTCTCGATTTGGAGCACCCAGACGAGAAGAGAAAGCTTACAGATGAAGAAATGGCCACTCTAGCCTCTGAATTCCTCAACGCCGGCACCGACACCACGTCGACGGCCCTGCAATGGATAATGGCGAATTTGGTGAAATACCCAGAAATCCAACACAAGCTTTTTGCAGACATGAAAGGAGTAATGGGAGATGGAACAGGGGAGGAGGTGAAGGAAGAGGATTTGGGGAAGCTTCCATATCTGAGAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGAAGACACGGTGTTGGAGAATTACGTGATACCAAAGAACGGAACTGTAAATTTCATGGTGGCGGAGATGGGTTGGGATCCGGAAGTGTGGGAAGAGCCGATGGCGTTCAAGCCGGAGAGGTTCATGAAGGGCGGGGAAGAAGAAGAAGTGGCGGGGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTCGGCGCAGGGAGGAGGATGTGCCCAGGATTCGGTCTGGCAATTCTCCATTTGGAGTATTTCATAGCCAATCTGGTTTGGAGGTTTGAATGGAAGGCGGTGGAGGGTGACGGCGTCGATCTGTCGGAGAAGGTGGAGTTCACGGTGGTGATGGAGAAGCCTCTGAAAGCCAACATAATCCCCAGGTCTTAA | 1563 | 50.61 | METWFIIIISLCFCSLLNSIFSHCRSSINLPPGPPSIPIFTNLQWLRRSPLQIESLLRTSVAKYGPIITLPIGTRPTVFIADRSIAHNALVLNGALFADRPTALPISKIASSNQHNINTASYGPLWRLLRRNLTSQILHPSRVKSYARARRWVLDILIDRFLSHSQLGEPIFVVDHFQYAMFCLLVLMCFGDKLEESQIKEIENVQRAMLVNLGRFNALNFWPKLTKIFLQKRWETFHELKRKRDEVTIPLIEARRKAIQNRENRANRANRAEAEEEKEEFVVSYVDTLLDLEHPDEKRKLTDEEMATLASEFLNAGTDTTSTALQWIMANLVKYPEIQHKLFADMKGVMGDGTGEEVKEEDLGKLPYLRAVVLEGLRRHPPGHFVLPHAVKEDTVLENYVIPKNGTVNFMVAEMGWDPEVWEEPMAFKPERFMKGGEEEEVAGFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFIANLVWRFEWKAVEGDGVDLSEKVEFTVVMEKPLKANIIPRS | 520 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 4543054 | 4544616 | + | CmaCh20G009270.1 | Cma20g00927 | 316741 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 370 | 388 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 411 | 435 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 455 | 465 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | E-class P450 group I signature | 465 | 488 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | SUPERFAMILY | Cytochrome P450 | 31 | 519 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 517 | - | - | |
Cma20g00927 | 520 | PANTHER | CYTOCHROME P450 | 4 | 517 | - | - | |
Cma20g00927 | 520 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | P450 superfamily signature | 371 | 382 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | P450 superfamily signature | 456 | 465 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | Coils | Coil | 255 | 279 | - | - | |
Cma20g00927 | 520 | Pfam | Cytochrome P450 | 31 | 510 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00927 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 458 | 467 | IPR017972 | GO:0005506|GO:0016705 | |
Cma20g00927 | 520 | Gene3D | Cytochrome P450 | 24 | 520 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g01419 | Cma-Chr4:7255537 | Cma20g00927 | Cma-Chr20:4543054 | 3.28E-117 | dispersed | |
Cma15g01047 | Cma-Chr15:6566485 | Cma20g00927 | Cma-Chr20:4543054 | 0 | dispersed | |
Cma20g00927 | Cma-Chr20:4543054 | Cma20g00929 | Cma-Chr20:4568111 | 0 | dispersed | |
Cma20g00927 | Cma-Chr20:4543054 | Cma20g00928 | Cma-Chr20:4560155 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma20g00927 | K24184 | - | csv:101204559 | 847.04 |