Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g00931 ATGGCGATGTGGTTTATCATCGTCGTCTCCCTCTGCATCAGCTATGTTCTAAGCTCCATTTTAAGCCATTTTCGAAGCTCCACAAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCATCTCCACTTTCCTATGGCTCCGCACATCCAATCTCCAATTGGAGTCTTACCTTCGCACCGCTGTCGCCAAATATGGCCCCATCGTCACCCTCCGCAGAGGCTCTCGCCTCTCCATCTTCATCGCCGACCACTCAATTGCCCACAAGATCCTCGTCCAAAACGGTGCTCAGTTTTCCGGCCGACCACCGGCGCAACCCGTTAGCAAGCTCTTAACCAGTAACCAACACAGTATCAGCTCTGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTTCAATCTTCTCGGGTTAAGTCCTATAATCGAGCTCGCAAGTGGGTTTTGGATATTCTTATTAATCGGCTTGTTTCTCATTCGAAATCTGACACTCCCGTTACCGTCATCGATCATTTTCACTACGCCATGTTTTGTTTGTTGGTGTTGATGTGCTTTGGGGATAGGCTTGACGAATCCCATATCAGGGAAATCATGGACGTAGAGCGAGCGGTTGTATTGAGTTTTGAGCGTTTCAATGTTCTCAATTTCTGGCCTAAATTCACCAAGTTTTTGCTCCGAAAACGCTGGCAGACGCTTCTCCAACTAAGAAAGAACCAAGAGGATGTCATAATTCCATTGATTGAAGCTCGGCGGAAGGCCAATCAAAACAGAGTAAACAGAGCAAACAGAGCAAACAGAGCCGAAACTGAAGAAGAAAAAGAAGAATTCGTGGTGTCATATGCGGACACACTTCTCGATTTGGAGATACCCGACGAGGAAAATAGAAAGCTTACCAATGAGGAGATTGTGACCATATGCTCGGAATTTCTCAACGCCGGCACCGACACCACGTCGACGGCCCTGCAATGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAACACAAGCTTTTTGCAGAGATAAAAGGAGTAATGGGGGATGGAACAGGGGAGGAGGTGAAGGAAGAGGATTTGCGGAAGGTTCCATATCTGAAAGCGGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGAAGAAACAGAGTTGGAAAATTACGTGATACCAAAGGATGGGACGGTAGATTTCATGGTGGCGGAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCGGCGACGTTTATGCCGGAGCGGTTCATGAAAGGAGGGAAAGAAGAAGCAGAAGTGGCGGAGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGGATATGCCCAGGATTTGGTCTGGCGATTCTTCATTTGGAGTATTTCCTTGCTAATTTGGTTTGGCGGTCGGAATGGAAGGCCGTGGAGGGAGACGAAGTTGATCTGTCGGAGAAGTTAGAGCTTACGGTTGTCATGAAAAAGCCTCTGAAGGCAAGAATCCATTCCCGGGGATAA 1569 48.31 MAMWFIIVVSLCISYVLSSILSHFRSSTKLPPGPPSIPIISTFLWLRTSNLQLESYLRTAVAKYGPIVTLRRGSRLSIFIADHSIAHKILVQNGAQFSGRPPAQPVSKLLTSNQHSISSASYGPLWRLLRRNLTSQILQSSRVKSYNRARKWVLDILINRLVSHSKSDTPVTVIDHFHYAMFCLLVLMCFGDRLDESHIREIMDVERAVVLSFERFNVLNFWPKFTKFLLRKRWQTLLQLRKNQEDVIIPLIEARRKANQNRVNRANRANRAETEEEKEEFVVSYADTLLDLEIPDEENRKLTNEEIVTICSEFLNAGTDTTSTALQWIMANLVKYPEIQHKLFAEIKGVMGDGTGEEVKEEDLRKVPYLKAVVLEGLRRHPPGHFVLPHAVKEETELENYVIPKDGTVDFMVAEMGWDPKVWEDPATFMPERFMKGGKEEAEVAEFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFLANLVWRSEWKAVEGDEVDLSEKLELTVVMKKPLKARIHSRG 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4577692 4579260 - CmaCh20G009310.1 Cma20g00931 316745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g00931 522 PANTHER CYTOCHROME P450 4 518 - -
Cma20g00931 522 SUPERFAMILY Cytochrome P450 23 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 Pfam Cytochrome P450 31 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 Gene3D Cytochrome P450 24 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00931 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 518 - -
Cma20g00931 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma20g00929 Cma-Chr20:4568111 Cma20g00931 Cma-Chr20:4577692 0 dispersed
Cma20g00931 Cma-Chr20:4577692 Cma20g00945 Cma-Chr20:4766791 3.64E-140 dispersed
Cma20g00931 Cma-Chr20:4577692 Cma20g00932 Cma-Chr20:4582877 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g00931 K24184 - csv:101220777 753.821