Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g00932 ATGGAGATTTGGTTCATCATCCTCGTCTCCCTCTGCATCAGCTATCTTCTAAGCTCCATTTTTAGCCATTTCGGAAGCTCCACCAAGCTCCCACCAGGCCCTCCTTCAATCCCCATCATCTCCACTTTCCTATGGCTCCGCACATCGCCTCTCCAATTGGAGTCTTACCTCCGCACCGCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCATTGGCTCTCGCATCTCCATCTTCATAGCCGACCGCACCATTGCCCACAACGCCCTCCTCCAACACGGCGCTCTCTTCGCCGACCGCCCACCACCTCCTCCTTTGACCAAAATTCTCTTCAGCAACCAGCACAGCATCCACTCCGCTCCTTACGGTCCACTCTGGCGCCTACTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGTGTCAGGTCCTACGCTCCTGCTCGCAAGTGGGTTTTGGATATTCTTCTTAAACGCCTTCACTCCCACTCTGAATCGGGAACTCCCGTCTGTGTTGTTGATCATTTTCAGTACGCCATGTTCTGTTTGCTGGTGCTAATGTGCTTTGGGGATAAACTCGACGAACCCAAAATCAAAGAAGTGGAGAATGTGCAGCGTACGATGCTGCTAAGTCTTAGTCGATTTGGTCTCCTCAATTCATCGCCTAAATTGACAAAGATTTTCCTTCCAAAACGCTGGGAGGAGTTTCTCCAACTAAGAAAGGACCAAGAGAGAGTCATAATCCCCTTAATCGAAGCAAGAAGGAAGGCCAAGCAAAACAGAGGAAACAGAGAAGAAAACAGAGAAGGTAAAGAAGAAGATGAAGATTTCGTGTTGTCGTATGTGGACACACTTCTCGAATTACGCCACCCCGAAGAGGAAAATAGAAAGATAACAGACGGCGAAATGGTCAGTCTATGCTCGGAATTCCTCACTGGCGGCATCGATACCACTGCCACGACCATGCCATGGATAATGGCGAATTTGGTGAAATACCCAGAAATCCAACACAAGATTTTTGCAGAGATGAAAGGAGTAATGGGGGATGGAACATCGGAGGAGGTGAAGGAGGAGGATTTGGGGAAACTTCCATATCTGAAAGCAGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCTTTTCCTAGAAGCACGAGGGGTGAAAGAGGATATAGAATTCGAAAACTACGTGATACCCAAGAACGCGACTGTAAATTTCATGGCGACGGAGATGGGTCGGGGTGCAGATGTATGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGGGAGGAGGGGCGGCGGCGTTTGATGTAACGGGGAGCAGAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATGTGTCCGGGATATGGTTTGGGGATTCTTCATTTGGAATATTACTTAGCGAATATGATATGGAGGTTTGAATGGAAGGCTGTGGATGGTGACGATGTTGATCTGTCGGAGAAGATGGAGTTTACCGTTGTGATGAAAAACCCTCTGAAAGCCACCATAAGTCCCAGGTTTTGA 1545 49.51 MEIWFIILVSLCISYLLSSIFSHFGSSTKLPPGPPSIPIISTFLWLRTSPLQLESYLRTAVAKYGPIVTLRIGSRISIFIADRTIAHNALLQHGALFADRPPPPPLTKILFSNQHSIHSAPYGPLWRLLRRNLTSQILHPSRVRSYAPARKWVLDILLKRLHSHSESGTPVCVVDHFQYAMFCLLVLMCFGDKLDEPKIKEVENVQRTMLLSLSRFGLLNSSPKLTKIFLPKRWEEFLQLRKDQERVIIPLIEARRKAKQNRGNREENREGKEEDEDFVLSYVDTLLELRHPEEENRKITDGEMVSLCSEFLTGGIDTTATTMPWIMANLVKYPEIQHKIFAEMKGVMGDGTSEEVKEEDLGKLPYLKAVVLEGLRRHPPGLFLEARGVKEDIEFENYVIPKNATVNFMATEMGRGADVWEDPMAFKPERFMGGGAAAFDVTGSREIKMMPFGAGRRMCPGYGLGILHLEYYLANMIWRFEWKAVDGDDVDLSEKMEFTVVMKNPLKATISPRF 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4582877 4584421 - CmaCh20G009320.1 Cma20g00932 316746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g00932 514 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 512 - -
Cma20g00932 514 SUPERFAMILY Cytochrome P450 31 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 PANTHER CYTOCHROME P450 4 512 - -
Cma20g00932 514 Pfam Cytochrome P450 31 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma20g00932 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Cma20g00932 514 Gene3D Cytochrome P450 25 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00476 Cma-Chr2:2508353 Cma20g00932 Cma-Chr20:4582877 8.36E-147 dispersed
Cma20g00928 Cma-Chr20:4560155 Cma20g00932 Cma-Chr20:4582877 0 dispersed
Cma20g00932 Cma-Chr20:4582877 Cma20g00945 Cma-Chr20:4766791 1.17E-137 dispersed
Cma20g00931 Cma-Chr20:4577692 Cma20g00932 Cma-Chr20:4582877 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g00932 K24184 - csv:105434706 809.675