Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma20g00975 | ATGGATTTTCTCTCTGTTTTCCTGCTCCTCCTTCTTGTTTTCCTTTTCCTGCAACAATTCATTACCCGCCGGCGAAATCTCCCACCGAGCCCACCGTCTGTTCCGATCATCGGCCATCTCCACCTCCTTCAACGACCAATCCACCAGAACTTCCACAACATCGCCGCCAAATACGGACCCATTTTCACTCTCCGATTCGGATCTCGCCTTGCCCTCATAGTCTCTTCACTCCAACTAGCCGAAGAATGCTTCACCAAAAACGATGTCGTTTTCGCCAACCGTCCTCGTTTGCTCATCGGCAAATACCTCGGCTACAACTTCACCACCATCTCCACCACACCTTACGGCGACCTCTGGCGAAACCTTCGTCGGCTCACCTCTATGGAAGTCTTTTCCACGGCGCGTCTCAACGCAGCTCTCAGCATCCGTAAGGATGAAATCCGGCGATTGTTGGTCAAACTCCATTCCGAATCGTTTGCTAAAGTGGAGTTGAAATCGATGTTTTCAGAATTGAGTTTCAACGTTGTGATGAGGGTTGTGACCGGAAAACGGTACTTCGGAGAGGAGGTTTCCAATGAAACAGAGGCGAGGGAGTTCAGAGAGCTTATGGATGAAATATCGCGTCATGGAGGAGCGTCGAATTGGATCAATTTCATGCCGATTTTGAAATGGATTGGGTTTGGTGAATATGAGAAGAGTTTGGCCAAATTAACGAAAAGGGCCGATAAATTTATGCAGAAATTGGTTGAATATCGCCGGAATCAGACAGGATTTGAAATAGAAAAACAGAGTACTCTGCTTGATCGGCTTCTGGAACTTCAGGCATCTGAGCCGGAATATTACTCCGATGAGATCATCAAAGGGGTCGTTCTGGTTTTGTTGCGTGCCGGAGTTGACTCAACCTCTGTGACCATGGAATGGGCAATGACTCAATTACTCAACAATCCGGAGGTGATATCCAAAGCCAAAGCCGAGATCGATACCAAGATCGGTCGAGATCGACTCGTTGATGAATCAGATCTCGCCAACCTCCACTACCTTCAAGCCATTATTTATGAGACCTTCCGATTGCACCCTGCAGCGCCGATGCTCCTCACACACTATTCCTCCGATGACTGCACCGTCGCAGGCTACGACATTCCTCGTGGGACGATGTTGATGGTCAATGCTTGGGCAATTCATAGAGACCCCAAGCTGTGGGATGACCCCATGAGCTTCCGACCTGAGAGATTCTTAGGGGCAGGGAATGAGTTGCTGTCGAACAAGTTAGTTCCTTTTGGGATGGGAAGGAGGGCTTGTCCTGGGGAAACTATGGCGCAAAGGTTAATAGGATTGAGTTTGGGGCTATTGATTCAGTGTTATGAGTGGAAGAATGTTGGATATCAAAAGGTAGACATGACTGAAGGTGGAGGTATCACCATTCAAAAAGTTCAGCCTCTGGAAACCATGTGTAGAGCTCTCCCAATTATGGATAAAGTTCTATCAAATGGTTTGGACTAA | 1500 | 47.87 | MDFLSVFLLLLLVFLFLQQFITRRRNLPPSPPSVPIIGHLHLLQRPIHQNFHNIAAKYGPIFTLRFGSRLALIVSSLQLAEECFTKNDVVFANRPRLLIGKYLGYNFTTISTTPYGDLWRNLRRLTSMEVFSTARLNAALSIRKDEIRRLLVKLHSESFAKVELKSMFSELSFNVVMRVVTGKRYFGEEVSNETEAREFRELMDEISRHGGASNWINFMPILKWIGFGEYEKSLAKLTKRADKFMQKLVEYRRNQTGFEIEKQSTLLDRLLELQASEPEYYSDEIIKGVVLVLLRAGVDSTSVTMEWAMTQLLNNPEVISKAKAEIDTKIGRDRLVDESDLANLHYLQAIIYETFRLHPAAPMLLTHYSSDDCTVAGYDIPRGTMLMVNAWAIHRDPKLWDDPMSFRPERFLGAGNELLSNKLVPFGMGRRACPGETMAQRLIGLSLGLLIQCYEWKNVGYQKVDMTEGGGITIQKVQPLETMCRALPIMDKVLSNGLD | 499 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 5068868 | 5070367 | - | CmaCh20G009750.1 | Cma20g00975 | 316789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma20g00975 | 499 | Coils | Coil | 234 | 254 | - | - | |
Cma20g00975 | 499 | Gene3D | Cytochrome P450 | 16 | 487 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 492 | - | - | |
Cma20g00975 | 499 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 4 | 492 | - | - | |
Cma20g00975 | 499 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 426 | 435 | IPR017972 | GO:0005506|GO:0016705 | |
Cma20g00975 | 499 | Pfam | Cytochrome P450 | 28 | 473 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 55 | 74 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 79 | 100 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 171 | 189 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 348 | 366 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 389 | 413 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 423 | 433 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | E-class P450 group I signature | 433 | 456 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | SUPERFAMILY | Cytochrome P450 | 28 | 481 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | P450 superfamily signature | 424 | 433 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00975 | 499 | PRINTS | P450 superfamily signature | 433 | 444 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma20g00975 | Cma-Chr20:5068868 | Cma20g00978 | Cma-Chr20:5097701 | 0 | dispersed | |
Cma20g00975 | Cma-Chr20:5068868 | Cma20g00976 | Cma-Chr20:5079793 | 6.46E-16 | tandem | |
Cma20g00975 | Cma-Chr20:5068868 | Cma03g00950 | Cma-Chr3:6782028 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma20g00975 | K13260 | - | csv:101210967 | 761.14 |