Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma20g00978 | ATGGCTCATATCTTGCTTTACATTTTCCTCTTTCCGATCACTCTCCTTTTAGCCCTCAAGTTCTTCCCACGCCATGGCAAAAACCTCCCACCAACCCCACTTTTTTCCCTTCCCATAATAGGCCATCTCCATCTCCTCAAACACCCCATCCACCGGACACTTCACCAGCTTTCAAACAAGCATGGCCATGTCTTCTCTCTCCGATTCGGATCCCGTCTGGTCGTCGTCGTATCATCTCCTTCCGCCGTTCATGAATGCTTCACAAATAATGACATCGTTCTTGCAAATCGACCATTTTTGAACACGGGAAAGCACTTGACGTATAACTTCACGGTACTAGCCGTCGCCCCTTACGGTGAGCTTTGGCGTACCCTTCGCCGCATTAGTACTCGTGAGATTTTCTCGACATGTCGACTTGATTTGTTCTTGGGAATTCGACAAGAGGAAGTGAAGCGATTGTTGTGTAAACTATGTCGTGGTAATACTGTTGTTGTCGAGGTTCAGCCTATGATTATGGATCTTACATCGAATATTGTGATGAGGATGGTTGCGGGGAAGAGGTATTTTGGAGACGATGTGTCGGATGAAGAACAAGCGGAGAGATTTAGAGATGTTGTGAAGAGAGTAATGTTGTATGCTGGGGCAACAAATCCAGGAGATTTCATACCCTTATGGAATTGGATTGATCCAAGTGGTTTTGAGAAGAAGATTATGAAGGTTGGAGAAGAAGCTGATGCTATCTTTCAAGGCTTGATTGATGAGATTAGGAACCAAAAAGGAAGTGGTAATACGATGATTGATCATTTGCTTCACTTGCAGACCACACAATCTGAATACTTCAGCGACCAAATTATCAAAGGCCTCATACATGTTATACTCTTAGCAGGAATCGATACAACAGCCGTGACATTAGAATGGGCACTCTCGCACCTGCTGAACAATCCAGAGGTGATAAAGAAAGCGAGGTTTGAGATAGAGCGTTGCACAGGACAAGACCGTCTAGTCAATGAAGAGGATTTGTCGAGTTTGAGTTATGTGCAAGGAATAATCTTAGAGACATTGCGGCTGACCCCAGCAGCTCCTTTGCTCGTGCCACACTGCGCATCTACAGATTGTAAAATCCAAGGCTATGATGTGCCACGTGACACGATCATATTTGTTAACGCTTGGGCGATACATCGAGATCCAAATCATTGGGAAGATGTCACAAGTTTTAGGCCTGAGAGGCATGAAAATGCAATAGAGTTATCTGATTCATACAAATTGTTACCATTCGGGTTGGGGAGGAGAGCGTGCCCGGGTGTAGGAATGGCGCAACGCATTGTTGGCTTGACCTTGGCTTCATTGATTCAATGCTTTGATTGGGAAAGAATGGATAGCTCACTAGTTGACATGACGGAAGGCCAAGGGATCACTATGCCAAAAGCTCAGCCGTTGGTAGCCAAGTGCAGACCACGCCCTATCATGAGAGCTCTTATTAGTGAAGCAATTCACCCTGTTTAG | 1503 | 45.24 | MAHILLYIFLFPITLLLALKFFPRHGKNLPPTPLFSLPIIGHLHLLKHPIHRTLHQLSNKHGHVFSLRFGSRLVVVVSSPSAVHECFTNNDIVLANRPFLNTGKHLTYNFTVLAVAPYGELWRTLRRISTREIFSTCRLDLFLGIRQEEVKRLLCKLCRGNTVVVEVQPMIMDLTSNIVMRMVAGKRYFGDDVSDEEQAERFRDVVKRVMLYAGATNPGDFIPLWNWIDPSGFEKKIMKVGEEADAIFQGLIDEIRNQKGSGNTMIDHLLHLQTTQSEYFSDQIIKGLIHVILLAGIDTTAVTLEWALSHLLNNPEVIKKARFEIERCTGQDRLVNEEDLSSLSYVQGIILETLRLTPAAPLLVPHCASTDCKIQGYDVPRDTIIFVNAWAIHRDPNHWEDVTSFRPERHENAIELSDSYKLLPFGLGRRACPGVGMAQRIVGLTLASLIQCFDWERMDSSLVDMTEGQGITMPKAQPLVAKCRPRPIMRALISEAIHPV | 500 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 5097701 | 5099797 | + | CmaCh20G009780.1 | Cma20g00978 | 316792 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma20g00978 | 500 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 7 | 491 | - | - | |
Cma20g00978 | 500 | Pfam | Cytochrome P450 | 30 | 476 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | P450 superfamily signature | 295 | 312 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | P450 superfamily signature | 348 | 359 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 82 | 103 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 174 | 192 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 284 | 301 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 304 | 330 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 347 | 365 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 388 | 412 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 7 | 491 | - | - | |
Cma20g00978 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506|GO:0016705 | |
Cma20g00978 | 500 | SUPERFAMILY | Cytochrome P450 | 30 | 486 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g00978 | 500 | Gene3D | Cytochrome P450 | 23 | 494 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g00951 | Cma-Chr3:6785337 | Cma20g00978 | Cma-Chr20:5097701 | 0 | dispersed | |
Cma08g00036 | Cma-Chr8:187633 | Cma20g00978 | Cma-Chr20:5097701 | 0 | dispersed | |
Cma17g01387 | Cma-Chr17:9243802 | Cma20g00978 | Cma-Chr20:5097701 | 4.09E-179 | dispersed | |
Cma20g00975 | Cma-Chr20:5068868 | Cma20g00978 | Cma-Chr20:5097701 | 0 | dispersed | |
Cma20g00978 | Cma-Chr20:5097701 | Cma20g00980 | Cma-Chr20:5112338 | 0 | proximal | |
Cma20g00977 | Cma-Chr20:5083694 | Cma20g00978 | Cma-Chr20:5097701 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma20g00978 | K13260 | - | csv:105434396 | 835.099 |