Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma20g01051 ATGAATCATGCAATGGAGATCGTGCATGAACCTCCAAATGCCAAGTTTGAGTTCACTCCAACATGGATCGTCGCCGTTGTTTCCTCCATTATCGTTATCATTTCCTTCTCTCTTGAACGTGGCCTTCATCATCTTGGACAGTTGTTGAAACATAAAAAGCAGGATCAACTGAATCATGCTGTGCTGAAATTAAAGGAAGAGTTGATGATTTTAGGGTTCATCTCCCTATTATTGAATGTGTTTCAAGGGGCAATTGGACAGTTCTGTATGCCTAGAGATTTTGCATACCATATGCTTCCATGCAAGAGAACTGTATCCGTTGTTCATCATTTCTTGTCTCCTACGTCCCTCGACGGATATAATACTCACCGTCATCTCCTATCGACCAATACAAATTTTCAACATTGTTTACGGAAAGGAAAGGTTCCTCTATTGTCTTTGGAAGCTTTGCATCAACTCCATATATTCATATTTGTGTTGGCAGTTGTTCATGTCATCTTCTGTGCTATAACCATGCTTCTAGCTGCTGCAAAGATACAACAATGGAAGAGATGGGAAGATTCTATTCATCGAGGACTCGCACAATCTCAAAATGATAATGAGTTTAAAGAACGTGCCGAGGGATATTGGCTAAATGCTGCTGTCATAGCTTGGATGGTGGCATTTGTGAAGCAGTTTCATGGATCAATCACAAAGTCGGATTACATTTTTCTTCGACGAGGCTTTATTAAGAAACATTGTCCCGGGGAACCAAAATTTAATTTCTACGACCATATTACAAAGACCTATCAACATGATTTCAAGAAAGTTGTAGGCATAAGTTGGTATCTTTGGGCCTTTGTTGTGCTCTTCTTGCTTCTTAATCTTGAAGGATGGCACACTTACTTTTGGTTGGCCTTTCTACCCCTCATTATGCTACTTCTAGTAGGGGCAAAGTTGGAATACATAATTACCCGAATGGCTCAAGAACTAAACTCGAGAATCGTTGACAAAGAAGCACAACAAGAACATGACATCCATAGAATTCAAAGACGACATAACGAGATCAAGAAACATGGTAGCCGCCATGAAGTGAATCCCTCAGATGATCATTTTTGGTTTGCTCGTCCTTCTCTTGTCCTCATTTTGATTCACTTCATTCTCTTTCAAAACTCTTTCGAGATTGCCTTCTTCTTTTGGATTTGGACAACTTATGGGTTTAAGTCTTGCATTATGGAGAGACCGGCTTTTATCATCACCAGACTAGTCCTGGGTGGAATTGTCCAAGTTCTTTGCAGTTATAGCACATTGCCTTTGTACTCTCTAGTCACTCAGATGGGAAGCGAATATAAGAAGCCAGAGGAAGAAGGTGAAGTGTCAGAGGCTGAAGAACAACGAGCAACATAG 1386 40.48 MNHAMEIVHEPPNAKFEFTPTWIVAVVSSIIVIISFSLERGLHHLGQLLKHKKQDQLNHAVLKLKEELMILGFISLLLNVFQGAIGQFCMPRDFAYHMLPCKRTVSVVHHFLSPTSLDGYNTHRHLLSTNTNFQHCLRKGKVPLLSLEALHQLHIFIFVLAVVHVIFCAITMLLAAAKIQQWKRWEDSIHRGLAQSQNDNEFKERAEGYWLNAAVIAWMVAFVKQFHGSITKSDYIFLRRGFIKKHCPGEPKFNFYDHITKTYQHDFKKVVGISWYLWAFVVLFLLLNLEGWHTYFWLAFLPLIMLLLVGAKLEYIITRMAQELNSRIVDKEAQQEHDIHRIQRRHNEIKKHGSRHEVNPSDDHFWFARPSLVLILIHFILFQNSFEIAFFFWIWTTYGFKSCIMERPAFIITRLVLGGIVQVLCSYSTLPLYSLVTQMGSEYKKPEEEGEVSEAEEQRAT 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 7843989 7850835 - CmaCh20G010510.1 Cma20g01051 316865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma20g01051 461 Pfam Mlo family 15 446 IPR004326 GO:0006952|GO:0016021
Cma20g01051 461 PANTHER MLO-LIKE PROTEIN 13 15 458 - -
Cma20g01051 461 PANTHER MLO-LIKE PROTEIN 1 15 458 IPR004326 GO:0006952|GO:0016021
Cma20g01051 461 MobiDBLite consensus disorder prediction 442 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma20g01051 Cma-Chr20:7843989 Cma05g00968 Cma-Chr5:7813496 1.99E-109 dispersed
Cma20g01051 Cma-Chr20:7843989 Cma08g00991 Cma-Chr8:6184235 1.29E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma20g01051 K08472 K01179 csv:101216903 686.026