Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma20g01100 | ATGGAAACACCACTTGGTGGCTCTTCACCCTNNCCACACTTCCTCCCCTCCCAATCCTCTCCTCTCCTCCTCCTCCTCGCTTTTCTCTCCCTCGCCTTCCTCTCCGCCCTTCTCGCCACCGCCGGCACTGCCTGGCCCAATGGAAGGAACCATAGAGGCCAACGTCCCATCCCCGGCGCCCGCGGCCTTCCAATTCTCGGCAGCTTGTTCTCTCTCACCCACGGCCTTCCCCACCGGACTCTGGCTGCCATGGCGGCAGCCAGAGGCAGCCCTCAGCTAATGGCCTTCAGTCTAGGCTCCACCCCTGTTGTGGTTACCTCCGACCCTCATACAGCCAAGGAGATTCTAACCTCACCCCACTTCGCCAACCGCCCGCTCAAGCAGTCCGCCAAGAGTTTGATGTTCGGGCGAGCCATAGGGTTCGCCCCAAACGGCACCTACTGGCGTCTACTGAGGCGAATCGCGTCGACCCACTTATTCTCTCCCAAACGTATCGCCGCCCACGAACCCGCTCGCCAGCTCGAATGCGCCGCCATGTTACAAACCATTCACAATCAACAAACCCTTCACGGAGCCGTTTCGTTACGAAAACACCTCCAAGCCGCTGCCTTGAACAACGTGATGTGGAGCGTGTTTGGAAAGCGGTTTGACCCGACCGATTCCAAATTAGAAACGGTTCGAGAGTTGGTTCGTGAAGGGTTTGAGCTGCTCGGCGCGTTTAATTGGTCGGATTATCTCCCCTGGCTTAGTGGATTCTACGACCCGAGCCGTATCCGCCAGCGCTGCGCCGAACTCGTCCCTAAAGTTAATGAATTTGTCCGCGGCGTAATTGATGAGCACCGCCGCGGTGAAGCTCCGTCGGATGATTCCGATTTTGTCGACGTTTTGCTGTCTCTCGACGGCGATGAAAAGCTGAACGAGGATGACATGGTGGCTGTTTTATGGGAAATGATTTTCCGGGGTACGGACACGACGGCGCTGCTGACGGAGTGGGTGGTGGCGGAGTTAATTTTACATCCGGAGATACAGGGAGAAGTCGCGAGGGAAATCGCCACCGCTGTGGGCGGAAGGAGCCTCTCAGACGCTGACGTGGCGAATCTTCCGTACTTACAGGCGGTGGTGAAGGAGACGCTACGACTACACCCACCAGGGCCACTACTCTCGTGGGCCCGCCTCTCTTCGTCGGATGTCCACCTCAGCAACGGCATGCTTATCCCAGAGAACACAACCGCCATGGTCAACATGTGGGCCATAACGCACGACCCCCACGTATGGGAAGATCCACACGTGTTCAACCCAGGGAGGTTCGTGGGTGCTGACGTGGACGTCAGAGGCTGCGACCTCCGACTAGCGCCGTTCGGAGCAGGGCGGAGGGTGTGCCCAGGGAAGAATCTTGGACTGGTCACGGTCACTCTGTGGGTGGCTAAGCTGGTCCATCACTTTAAATGGGGTCCGGACCCAGCCGCCCCTGTGGACCTGAGTGAGGTGCTGAAGCTCTCGTGTGAGATGAAGCATCCGCTAAGTGCGGTGGCAGTGACAAGAGAAAATGGATTTTATTAG | 1560 | 57.88 | METPLGGSSPXPHFLPSQSSPLLLLLAFLSLAFLSALLATAGTAWPNGRNHRGQRPIPGARGLPILGSLFSLTHGLPHRTLAAMAAARGSPQLMAFSLGSTPVVVTSDPHTAKEILTSPHFANRPLKQSAKSLMFGRAIGFAPNGTYWRLLRRIASTHLFSPKRIAAHEPARQLECAAMLQTIHNQQTLHGAVSLRKHLQAAALNNVMWSVFGKRFDPTDSKLETVRELVREGFELLGAFNWSDYLPWLSGFYDPSRIRQRCAELVPKVNEFVRGVIDEHRRGEAPSDDSDFVDVLLSLDGDEKLNEDDMVAVLWEMIFRGTDTTALLTEWVVAELILHPEIQGEVAREIATAVGGRSLSDADVANLPYLQAVVKETLRLHPPGPLLSWARLSSSDVHLSNGMLIPENTTAMVNMWAITHDPHVWEDPHVFNPGRFVGADVDVRGCDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWGPDPAAPVDLSEVLKLSCEMKHPLSAVAVTRENGFY | 519 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 8558485 | 8560743 | - | CmaCh20G011000.1 | Cma20g01100 | 316914 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma20g01100 | 519 | Pfam | Cytochrome P450 | 58 | 490 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PANTHER | CYTOCHROME P450 FAMILY 78 PROTEIN | 23 | 516 | - | - | |
Cma20g01100 | 519 | PANTHER | CYTOCHROME P450 78A7-RELATED | 23 | 516 | - | - | |
Cma20g01100 | 519 | Gene3D | Cytochrome P450 | 47 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | SUPERFAMILY | Cytochrome P450 | 57 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | P450 superfamily signature | 372 | 383 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506|GO:0016705 | |
Cma20g01100 | 519 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | E-class P450 group I signature | 371 | 389 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | E-class P450 group I signature | 87 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | E-class P450 group I signature | 202 | 220 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma20g01100 | 519 | PRINTS | E-class P450 group I signature | 414 | 438 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma18g00699 | Cma-Chr18:6378834 | Cma20g01100 | Cma-Chr20:8558485 | 4.78E-163 | dispersed | |
Cma20g01100 | Cma-Chr20:8558485 | Cma14g00501 | Cma-Chr14:2445850 | 2.91E-88 | dispersed | |
Cma20g01100 | Cma-Chr20:8558485 | Cma05g00453 | Cma-Chr5:2082462 | 5.21E-170 | transposed | |
Cma20g01100 | Cma-Chr20:8558485 | Cma17g00500 | Cma-Chr17:3196541 | 7.65E-170 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma20g01100 | K20619 | - | csv:101214099 | 770.385 |