Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00009 ATGACCTCATCTTCTTCTCCAGAACACCCACACATTCCCCTGCCTCTCAAACCCATCCCCGGCACCAATGGCTTCCCCATCTTTGGACCCATCAAAGATCGCTACCATTACTTCTACATCCAAGGCAGAGAAACCTTCTTCCGATCTCGAATGGCTAAATACAATTCCACTGTCTTCCGTACCAACATGCCGCCAGGTCCCTTCATCTCTTCCAATTCCAAAGTAATCGTCCTTCTAGACGCCCTCAGTTTTCCGATCCTCTTTGACACCACTAAAGTCGAGAAACGCAACGTTCTCGATGGAACTTACATGCCCTCCCTTGCCTTCACCGGAGGAATTCGTACTTGTGCTTTCTTAGACCCATCTGAGACAGAGCACTCTGTTCTCAAACGCCATTTCCTCAATTTTCTTGCCTCTCGTCACCACCAATTCATTCCTCTCTTTCGAACCTCCATCTCCGAGATGTTTGATAAACTTGAAAAGGAATTAAAAAACAATAACGTCGCCAATTTTAATCCCGTCAGTGATTCAGCATCCTTTGATTTCATCTTTCGATTGCTTTCCGATCGCAGCCCCAATAAGAATTTCATCTCCGAGGGACCGGGTTTAGTCGACCGATGGCTTACTATGCAGCTCGCTCCATTAGCGACTCTCGGTTTGCCCAAAATTTTCAGCTGCTTTGAAGATCTCATCATCCATACTTTCCGTTTACCGTTCGCACTCGTTAAAAGCGCTTACAGGAAGCTTTACGAATCGTTTTACGAGTCGTCGGGTACATTTCTAGACGAAGCCGAGAAACAGGGAATAAACAGAGAGAAAGCATGTCATAATTTAGTGTTTCTAGCTGGATTCAACGCATACGCCGGAATGAAAGTGCTGTTTCCGATTCTGCTAAACTGGGTCGGATCTGCCGGCGAGGAACTTCATCGGAAACTAGTCAGCGAAATCAGAGCCGCCGTGAAGAAAGACGAGGGAGTAACATTCGGGGCTTTAGAGAAGATGAGTCTGCTGAAATCCGTGGTGTACGAGGTTCTGAGGATTGACCCGCCGGTGCCGTACCAATACGCAAGGGCGAAACAAGACATTGTGATTGAGAACCATGATTCTGCTTTCAAGATCAAGAAAGGGGAAATGATTTTTGGGTATCAGCCGATTGCGACGAAAGATCCGAAGGTGTTTGAGAATGCGGAGGAGTTTGTGGGCGATAGGTTCGTGGGAGAGAAAGGAGAGAAGCTTTTGAAGTATGTTTATTGGTCAAACGGCAGGGAGACGGAGGAGCCGACGGCGGAGAACAAGCAGTGTCCGGCGAGGGATCTGGTGGTGCTGATGTCGAGAGTAGTTTTGGTGGAACTTTTCCTCCGCTATGACACGTTCGCCGTCGAAGGAACTCGGTCGTCGTTGGGTTGGTCTGTTAAGACACTCTATATTGGTGTTTTGGGAGGTGGAGGATATTAA 1455 47.7 MTSSSSPEHPHIPLPLKPIPGTNGFPIFGPIKDRYHYFYIQGRETFFRSRMAKYNSTVFRTNMPPGPFISSNSKVIVLLDALSFPILFDTTKVEKRNVLDGTYMPSLAFTGGIRTCAFLDPSETEHSVLKRHFLNFLASRHHQFIPLFRTSISEMFDKLEKELKNNNVANFNPVSDSASFDFIFRLLSDRSPNKNFISEGPGLVDRWLTMQLAPLATLGLPKIFSCFEDLIIHTFRLPFALVKSAYRKLYESFYESSGTFLDEAEKQGINREKACHNLVFLAGFNAYAGMKVLFPILLNWVGSAGEELHRKLVSEIRAAVKKDEGVTFGALEKMSLLKSVVYEVLRIDPPVPYQYARAKQDIVIENHDSAFKIKKGEMIFGYQPIATKDPKVFENAEEFVGDRFVGEKGEKLLKYVYWSNGRETEEPTAENKQCPARDLVVLMSRVVLVELFLRYDTFAVEGTRSSLGWSVKTLYIGVLGGGGY 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78963 80856 - MELO3C018412.2.1 Cme01g00009 316985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00009 484 PANTHER HYDROPEROXIDE LYASE 14 459 - -
Cme01g00009 484 Gene3D Cytochrome P450 14 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g00009 484 Pfam Cytochrome P450 307 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g00009 484 SUPERFAMILY Cytochrome P450 11 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g00009 484 PANTHER CYTOCHROME P450 26 14 459 - -
Cme01g00009 484 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g00009 484 PRINTS E-class P450 group IV signature 334 350 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g00009 484 PRINTS E-class P450 group IV signature 371 385 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00009 Cme-Chr1:78963 Cme03g01990 Cme-Chr3:27686708 5.53E-179 dispersed
Cme01g00009 Cme-Chr1:78963 Cme01g00010 Cme-Chr1:82985 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00009 K01723 - csv:101211574 891.723