Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00010 ATGGCTACTCCTTCTTCCTCCTCCCCTGAACTTCCTCTCAAACCAATTCCCGGTGGCTATGGCTTCCCCTTCCTCGGTCCCATCAAAGACCGTTACGATTACTTCTATTTCCAAGGTAGAGACGAATTCTTCCGTTCCCGGATTACCAAATACAACTCCACCGTCTTCCGCGCCAACATGCCACCGGGCCCCTTCATTTCCTCCGATTCCAGAGTCGTTGTCCTTCTCGATGCCCTCAGTTTTCCTATCCTCTTCGACACAGCCAAAGTCGAGAAACGCAACATTCTCGACGGAACTTACATGCCCTCCTTGTCCTTCACCGGCAACATTCGCACCTGTGCTTATTTGGACCCATCGGAAACAGAGCACTCTGTTCTCAAACGCCTCTTCCTCTCCTTTCTCGCTTCCCGCCATGACAGGTTCATCCCTCTGTTTCGAAGCTCCTTGTCTGAGATGTTTGTTAAGCTTGAAGATAAACTTTCCGAGAAAAAGAAGATCGCTGATTTCAACTCGATCAGCGATTCCATGTCGTTTGATTATGTTTTCCGTTTACTCTCCGATGGAACCCCTGATTCGAAATTAGCTGCTGAGGGACCTGGAATGTTCGATCTGTGGCTTGTGTTTCAACTCGCCCCATTGGCTTCCATTGGCCTTCCCAAAATTTTCTCTGTTTTTGAAGATCTCGTCATTCACACCATTCCCCTGCCTTTCTTCCCAGTCAAGAGTGGTTACAGGAAGCTTTATGAAGCGTTTTACTCCTCTTCTGGCTCATTTCTAGACGAAGCAGAGAAACAGGGGATAGACAGGGAGAAAGCATGTCACAATTTAGTGTTTCTCGCTGGATTCAACGCATACGGGGGAATGAAAGTCCTTTTTCCCACTTTACTGAAATGGGTCGGCACCGCCGGCGAGGATCTCCACCGGAAACTCGCCGAGGAAGTCAGGACAACCGTGAAGGAAGAAGGGGGACTGACTTTCTCCGCCTTGGAGAAAATGAGTCTGCTGAAGTCCGTCGTGTACGAAGCACTCAGGATCGAACCGCCGGTGCCGTTCCAGTACGGGAAAGCGAAGGAGGATATCGTGATTCAGAGCCACGATTCTTCTTTCAAGATCAAAAAAGGGGAGACGATTTTTGGTTATCAGCCGTTTGCTACTAAAGATCCGAAGATTTTTAAGGATTCGGAGAAGTTCGTGGGCGATAGGTTCGTGGGAGAGGAAGGGGAGAAGCTTTTGAAGTATGTTTACTGGTCAAATGAGCGGGAGACAGTGGAGCCGACGGCGGAGAACAAGCAGTGTCCGGGGAAGAATCTGGTGGTGCTGATAGGTAGGATTATGGTGGTGGAATTCTTCCTTCGTTATGATACGTTCACCGTGGAGGTCGCAGATTTGCCGCTGGGTCCGGCAGTGAAGTTCAAGTCCTTAACCAGAGCAACCGATATGGTTTAA 1446 49.31 MATPSSSSPELPLKPIPGGYGFPFLGPIKDRYDYFYFQGRDEFFRSRITKYNSTVFRANMPPGPFISSDSRVVVLLDALSFPILFDTAKVEKRNILDGTYMPSLSFTGNIRTCAYLDPSETEHSVLKRLFLSFLASRHDRFIPLFRSSLSEMFVKLEDKLSEKKKIADFNSISDSMSFDYVFRLLSDGTPDSKLAAEGPGMFDLWLVFQLAPLASIGLPKIFSVFEDLVIHTIPLPFFPVKSGYRKLYEAFYSSSGSFLDEAEKQGIDREKACHNLVFLAGFNAYGGMKVLFPTLLKWVGTAGEDLHRKLAEEVRTTVKEEGGLTFSALEKMSLLKSVVYEALRIEPPVPFQYGKAKEDIVIQSHDSSFKIKKGETIFGYQPFATKDPKIFKDSEKFVGDRFVGEEGEKLLKYVYWSNERETVEPTAENKQCPGKNLVVLIGRIMVVEFFLRYDTFTVEVADLPLGPAVKFKSLTRATDMV 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82985 85696 - MELO3C018413.2.1 Cme01g00010 316986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00010 481 Gene3D Cytochrome P450 11 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g00010 481 SUPERFAMILY Cytochrome P450 12 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g00010 481 PANTHER CYTOCHROME P450 26 10 458 - -
Cme01g00010 481 PANTHER HYDROPEROXIDE LYASE 10 458 - -
Cme01g00010 481 Pfam Cytochrome P450 306 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00010 Cme-Chr1:82985 Cme03g01990 Cme-Chr3:27686708 0 dispersed
Cme01g00009 Cme-Chr1:78963 Cme01g00010 Cme-Chr1:82985 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00010 K01723 - csv:101211324 907.131