Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00048 ATGACGACATCGGCTGATGAAGGACAGTTTTTAAACATGTTGTTGAAGTTAATAAATGCGAAGAAGACGATGGAGATTGGAGTTTATACTGGGTATTCGCTTCTGGCTACAGCCCTAGCTCTTCCTGAAGATGGAACGATTCTGGCTATGGATATTAATAGAGAAAATTATGAGTTGGGTTTGCCGGTGATTGAAAAGGCCGGCGTTGCTCATAAAATCGAGTTCAAAGAAGGACCTGCTCTCCCAGTTCTTGACGACATGGTTGCCGATAAGAAGAATCATGGAAGTTATGACTTCATATTTGTGGATGCTGATAAAGACAACTACATAAATTACCATAAAAGATTGATCGATCTAGTTAAAGTTGGAGGAGTGATCGGATATGACAACACTCTATGGAACGGATCAGTGGTTGCTCCACCTGATGCACCCATGCGCAAGTATGTTAGGTATTACAGGGACTTTGTGTTGGAGCTCAACAAAGCTCTTGCTGCTGACCCTAGGATTGAGATTTGTATGCTCCCCGTTGGTGATGGAATCACTCTTTGCCGTCGAATCAGCTAA 564 42.73 MTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDDMVADKKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIS 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 394922 396979 - MELO3C018450.2.1 Cme01g00048 317024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00048 187 CDD AdoMet_MTases 25 126 - -
Cme01g00048 187 PANTHER O-METHYLTRANSFERASE-RELATED 1 187 - -
Cme01g00048 187 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 185 IPR029063 -
Cme01g00048 187 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 1 187 - -
Cme01g00048 187 Pfam O-methyltransferase 1 186 IPR002935 GO:0008171
Cme01g00048 187 Gene3D Vaccinia Virus protein VP39 1 187 IPR029063 -
Cme01g00048 187 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 186 IPR002935 GO:0008171
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00048 Cme-Chr1:394922 Cme10g00654 Cme-Chr10:4174499 1.05E-65 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00048 K00588 - csv:101205648 377.481