Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme01g00101 | ATGGACTCCTCGGAGTACCACAAACCATCCTTCCGAACCTCGAAGAAACGCGACTCGGAGGAACACTCTTTGCAACAGACTACTGCCAATAAGAGACCCGTGCTTGGCGAGATCACTAACTCGTTGATCTTTAGTTCGAGTCAGTGCTCCTTTTCTGACCAGGAAATGACGGATAAGGATCTAGACACGGATGAACTCCCGGAAGTAAGGTCTGTTGATTGTCCAGAGAAATCTGGCTCGTCGTTGAGCATTTATAACCACCTTCGATCTCTTGAGATGGAGTTACACATGAAGTTCCTACCCAACAACATCGAAAACGCTCATAATGGTGATTCCGGTTTAACTTTCACTCGTTGGCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCCGAGGAATACAAGCTTGTGTCAGACACCCTATATCTCACCATATCACATATGGACAGATACTTATCCTGGCATGTTGTTGACAGAAACAATCTACAACTTCTTGGTGTTTGTTGCATGCTAATTGCATCGAAGCATGAAGAGATCAGTCCTCCACATGTTGAAGATTTCTGTTATATAACAGATAATACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACACAGATTCTTGACCTGTGAAGGCGCTCCCACCGTAAAAGTTTTCCTCAGGCAAGAATGCTTTTCAACTATCATGTATTCACAGGCTCCAGATGTGGAATTTGAGTTGTTGATTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCGTTGTGCACAACTATTACCTTCAAAAGTCGCTGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGGGGAACATCCTTGGTGTTTAGCACTACAACATTACACCGGCTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACGAGCAATCAGAAACAAGTACAAGGAGAATAAGTTCAGGCGTGTGGCAGAGTTATCTTCACCCTCGGAAATTCCCGCAGATTATTTTGAGGACATTGTCAGCAATCATTCAACAGGTTCTTAA | 1080 | 42.59 | MDSSEYHKPSFRTSKKRDSEEHSLQQTTANKRPVLGEITNSLIFSSSQCSFSDQEMTDKDLDTDELPEVRSVDCPEKSGSSLSIYNHLRSLEMELHMKFLPNNIENAHNGDSGLTFTRWREILVDWLVEVAEEYKLVSDTLYLTISHMDRYLSWHVVDRNNLQLLGVCCMLIASKHEEISPPHVEDFCYITDNTYTKEQVLNMEREVHRFLTCEGAPTVKVFLRQECFSTIMYSQAPDVEFELLICYLAELSLLDHRCAQLLPSKVAASAIFLSRFTIQPGEHPWCLALQHYTGYRPSELKECILAIHDLQLNRKGSSLRAIRNKYKENKFRRVAELSSPSEIPADYFEDIVSNHSTGS | 359 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 705414 | 708702 | - | MELO3C018501.2.1 | Cme01g00101 | 317077 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme01g00101 | 359 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Cme01g00101 | 359 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Cme01g00101 | 359 | Pfam | Cyclin, C-terminal domain | 217 | 339 | IPR004367 | - | |
| Cme01g00101 | 359 | Gene3D | - | 84 | 336 | - | - | |
| Cme01g00101 | 359 | SUPERFAMILY | Cyclin-like | 217 | 341 | IPR036915 | - | |
| Cme01g00101 | 359 | CDD | CYCLIN | 120 | 208 | IPR013763 | - | |
| Cme01g00101 | 359 | Pfam | Cyclin, N-terminal domain | 86 | 211 | IPR006671 | - | |
| Cme01g00101 | 359 | PANTHER | CYCLINS | 27 | 350 | IPR039361 | - | |
| Cme01g00101 | 359 | PANTHER | CYCLIN-A3-1-LIKE | 27 | 350 | - | - | |
| Cme01g00101 | 359 | PIRSF | Cyclin_A_B_D_E | 2 | 348 | IPR039361 | - | |
| Cme01g00101 | 359 | SUPERFAMILY | Cyclin-like | 113 | 212 | IPR036915 | - | |
| Cme01g00101 | 359 | Gene3D | - | 97 | 215 | - | - | |
| Cme01g00101 | 359 | SMART | cyclin_7 | 221 | 309 | IPR013763 | - | |
| Cme01g00101 | 359 | SMART | cyclin_7 | 125 | 209 | IPR013763 | - | |
| Cme01g00101 | 359 | SMART | Cyclin_C_2 | 217 | 340 | IPR004367 | - | |
| Cme01g00101 | 359 | CDD | CYCLIN | 217 | 308 | IPR013763 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme01g00101 | Cme-Chr1:705414 | Cme01g02653 | Cme-Chr1:34000856 | 1.25E-78 | dispersed | |
| Cme01g00101 | Cme-Chr1:705414 | Cme03g02080 | Cme-Chr3:28205221 | 8.46E-97 | wgd | |
| Cme01g00101 | Cme-Chr1:705414 | Cme07g00308 | Cme-Chr7:1981391 | 1.38E-99 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme01g00101 | K06627 | - | csv:101213896 | 611.298 |