Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00184 ATGTTGCAGTCTTCGATTTGGCGAGTGAAAAAATTGAGTGTTCTGAGGCCTCAGATCTTTGCTCTTGGAAATTTTCGTTTCTCCACTTTTGCTGAACCGTCTTCAAAGCCTAATCCTCCGAGGGTTCCGAATCTCATAGGAGGGACTTTTGTTGATTCTCAATCCTCAGCATTTATAGATGTCATAAACCCAGCAACGCAAGAAGTTGTTTCTCAAGTTCCATTGACCACAAAGGATGAATTTAAAGCTGCAGTGTCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACTCCAGTTACAACTCGGCAACGAATTATGTTCAAGCTTCAAGAACTTATTAGCCGAGATATAGACAAACTTGCTCTAAATATTACCACGGAACAAGGAAAAACATTAAAGGACGCGCATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTGTCACATGGAATTGATACCTATAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCGTTCAATTTTCCAGCAATGATCCCCCTTTGGATGTTCCCAATTGCTGTTACATGTGGAAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCTGGGGCTTCTATAATCCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACTAATGATGTTGTTAATGCCATCTGTGATGATGAAGATATAAAAGCAATATCATTCGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGTGCAAAAAACCATGCCATTGTCTTGCCTGATGCTGGCATAGATGCTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGATGCATGGCACTTAGTACAGTTGTCTTTGTTGGAGACTCCAAGTTGTGGGAGGATAAACTTGTAGAACGTGCCAAAGCTCTAAAAGTAAACTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGATAGGATTCACAGATTGGTTCAATCTGGCATTGATAGTGGAGCCAGACTACTGCTAGATGGGAGAAATATAGTGGTTCCTGGATACGAGCATGGAAATTTTATTGGCCCTACTATCTTAACAGATGTGACACCGGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAAAGTTTAGAAGACGCCATTAGCATCGTTAATGGAAATAGGTATGGCAATGGAGCTTCCATATTCACCACATCTGGGATAGCCGCGAGGAAGTTTCAAACGGATATTGAAGCTGGACAGGTTGGGATCAACGTTCCAATTCCAGTTCCCTTGCCTTTCTTCTCGTTCACCGGCTCCAAGGCCTCTTTTGCTGGGGATCTCAACTTTTATGGGAAGGCAGGGGTGAACTTCTTCACACAGATAAAAACAGTGACACAACAATGGAAAGACTCAACTGGAGGGAGTGCAATCAATCTTGCAATGCCAACCTCTTTGAAGTCATAG 1614 43.49 MLQSSIWRVKKLSVLRPQIFALGNFRFSTFAEPSSKPNPPRVPNLIGGTFVDSQSSAFIDVINPATQEVVSQVPLTTKDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELISRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQSNMGAKNHAIVLPDAGIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEDKLVERAKALKVNSGTEPDADLGPVISKQAKDRIHRLVQSGIDSGARLLLDGRNIVVPGYEHGNFIGPTILTDVTPDMECYKEEIFGPVLLCMQAESLEDAISIVNGNRYGNGASIFTTSGIAARKFQTDIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSTGGSAINLAMPTSLKS 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1275062 1282829 + MELO3C018583.2.1 Cme01g00184 317160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00184 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 312 323 IPR016160 GO:0016491
Cme01g00184 537 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 15 534 - -
Cme01g00184 537 SUPERFAMILY ALDH-like 37 519 IPR016161 GO:0016491
Cme01g00184 537 CDD ALDH_F6_MMSDH 42 518 IPR010061 GO:0004491
Cme01g00184 537 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 15 534 IPR010061 GO:0004491
Cme01g00184 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 287 487 IPR016163 GO:0016620
Cme01g00184 537 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 44 518 IPR010061 GO:0004491
Cme01g00184 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 495 IPR016162 GO:0016491
Cme01g00184 537 Pfam Aldehyde dehydrogenase family 50 514 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00184 Cme-Chr1:1275062 Cme08g00717 Cme-Chr8:4771511 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00184 K00140 - csv:101204924 1032.71