Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme01g00251 | ATGGCGAAAGTTGGTTTCATTTTAGTTGTATACGTAGTGGCCGTGGTGTTGCTTAGCACCGCTGTGCATGGCCAAGGCACACGCCTCGGCTTTTATCGCGCCACGTGCCCTCAAGTCGAATCCATCGTTAGATCCACCGTTCAATCCCATTTTCGAATGGATCCATCGATTGCTCCTGGGTTGTTAAGAATGCACTCCCATGATTGCTTCGTTCGAGGGTGTGATGCTTCTGTGCTTCTTGCCGGTCCCAATTCTGAGAGGACGGCTGTGCCTAACCGTACTTTGAAAGGGTTTGAGGTCATTGACGACGCCAAGTCCCAACTTGAGGATGTCTGCCCAGGCGTTGTCTCGTGCGCTGATATACTTGCTCTTGCTGCTCGTGACTCAGTGGTTCTGGTAAAACGGGTGGAAGAAGTTGGGAAGTTCCGACGGGACGAAGAGATGGTAGAGTTTCGTTAG | 459 | 51.42 | MAKVGFILVVYVVAVVLLSTAVHGQGTRLGFYRATCPQVESIVRSTVQSHFRMDPSIAPGLLRMHSHDCFVRGCDASVLLAGPNSERTAVPNRTLKGFEVIDDAKSQLEDVCPGVVSCADILALAARDSVVLVKRVEEVGKFRRDEEMVEFR | 152 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1839547 | 1840091 | + | MELO3C028585.2.1 | Cme01g00251 | 317227 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme01g00251 | 152 | SUPERFAMILY | Heme-dependent peroxidases | 28 | 134 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | PANTHER | PEROXIDASE | 9 | 145 | - | - | |
Cme01g00251 | 152 | Gene3D | - | 28 | 151 | - | - | |
Cme01g00251 | 152 | Pfam | Peroxidase | 43 | 135 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | PRINTS | Plant peroxidase signature | 96 | 109 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | PRINTS | Plant peroxidase signature | 115 | 125 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | PRINTS | Plant peroxidase signature | 60 | 80 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | PRINTS | Plant peroxidase signature | 36 | 55 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | PANTHER | PEROXIDASE 25-RELATED | 9 | 145 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | PRINTS | Haem peroxidase superfamily signature | 116 | 133 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | PRINTS | Haem peroxidase superfamily signature | 58 | 72 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00251 | 152 | ProSiteProfiles | Plant heme peroxidase family profile. | 26 | 152 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g00251 | Cme-Chr1:1839547 | Cme02g01212 | Cme-Chr2:17452736 | 2.06E-51 | dispersed | |
Cme01g00251 | Cme-Chr1:1839547 | Cme01g00253 | Cme-Chr1:1843010 | 1.05E-67 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme01g00251 | K00430 | - | csv:101202985 | 229.565 |