Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00251 ATGGCGAAAGTTGGTTTCATTTTAGTTGTATACGTAGTGGCCGTGGTGTTGCTTAGCACCGCTGTGCATGGCCAAGGCACACGCCTCGGCTTTTATCGCGCCACGTGCCCTCAAGTCGAATCCATCGTTAGATCCACCGTTCAATCCCATTTTCGAATGGATCCATCGATTGCTCCTGGGTTGTTAAGAATGCACTCCCATGATTGCTTCGTTCGAGGGTGTGATGCTTCTGTGCTTCTTGCCGGTCCCAATTCTGAGAGGACGGCTGTGCCTAACCGTACTTTGAAAGGGTTTGAGGTCATTGACGACGCCAAGTCCCAACTTGAGGATGTCTGCCCAGGCGTTGTCTCGTGCGCTGATATACTTGCTCTTGCTGCTCGTGACTCAGTGGTTCTGGTAAAACGGGTGGAAGAAGTTGGGAAGTTCCGACGGGACGAAGAGATGGTAGAGTTTCGTTAG 459 51.42 MAKVGFILVVYVVAVVLLSTAVHGQGTRLGFYRATCPQVESIVRSTVQSHFRMDPSIAPGLLRMHSHDCFVRGCDASVLLAGPNSERTAVPNRTLKGFEVIDDAKSQLEDVCPGVVSCADILALAARDSVVLVKRVEEVGKFRRDEEMVEFR 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1839547 1840091 + MELO3C028585.2.1 Cme01g00251 317227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00251 152 SUPERFAMILY Heme-dependent peroxidases 28 134 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 PANTHER PEROXIDASE 9 145 - -
Cme01g00251 152 Gene3D - 28 151 - -
Cme01g00251 152 Pfam Peroxidase 43 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 PANTHER PEROXIDASE 25-RELATED 9 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00251 152 ProSiteProfiles Plant heme peroxidase family profile. 26 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00251 Cme-Chr1:1839547 Cme02g01212 Cme-Chr2:17452736 2.06E-51 dispersed
Cme01g00251 Cme-Chr1:1839547 Cme01g00253 Cme-Chr1:1843010 1.05E-67 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00251 K00430 - csv:101202985 229.565