Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme01g00253 | ATGACAAAAGTTGGTTTTGGTACTGCAATGCTTGTCCCGGTCATGTTTATGATTGTGTTGTTATTCACCGTCGTGAACGGTCAGGGCACACGCGTTGGTTTCTACTCCAGATCTTGCCCTCAAGCTGAGTCCATTGTTGCATCAACTGTTCGATCTCATTTTCAATCTGATCCTAAGATTGCTCCTGGTTTATTACGAATGCACTTCCACGATTGCTTCGTTCGGGGTTGTGATGCCTCCGTGCTCCTTGCTGGCGCTAACAGTGAGAGGACTGCATTACCAAACCTTTCGTTAAATGGGTTCGAAGTGATTGACGATGCTAAATCTCAACTTGAAGCTGCTTGTCCTGGCGTTGTATCTTGTGCGGACATTCTTGCTCTCGCTGCTCGTGACTCAGTGGTTTTGACAAGTGGAATGCGTTGGGGAGTGCCCACAGGACGAAGAGATGGGACAATTTCGGTGGCTTCAGAAGCTAACAACTTGCCTGGATTTACAGATTCTATTGAGGTTCAAAAGCAAAAATTTAGTGATAAAGGTCTCAACACTCAAGACCTTGTCACTCTCGTGGGTGGACACACAATTGGCACAACACAATGCCAATTTTTCAGATACAGACTCTTCAATTTCACAGCAGCCGGCGGTCCAGATCCAACCATGGACCCAGCCTTCGTGACTCAAATGCAGGCACTGTGTCCTCAAAACGGAGATGGAACCCGTAGGGTCGGTTTGGACACGGGCAGCGTCGGGCGTTTCGACACAACCTTCTTCTCAAACTTAAGGAACGGACGTGGGGTTTTGGAGTCGGATCAGAAGCTATGGACGGACGCTTCCACTCGTACTTTTGTACAACGGTTTCTGGGTTTGAGAGGCGTTTTGGGTTTGACCTTCAATCTTGAGTTTGGGAGATCTATGGTGAAGATGAGTAATATTGAAGTTAAAACTGGAAATCAAGGAGAAATTCGTAAAGTTTGTTCTGCAGTTAATTAA | 987 | 46.5 | MTKVGFGTAMLVPVMFMIVLLFTVVNGQGTRVGFYSRSCPQAESIVASTVRSHFQSDPKIAPGLLRMHFHDCFVRGCDASVLLAGANSERTALPNLSLNGFEVIDDAKSQLEAACPGVVSCADILALAARDSVVLTSGMRWGVPTGRRDGTISVASEANNLPGFTDSIEVQKQKFSDKGLNTQDLVTLVGGHTIGTTQCQFFRYRLFNFTAAGGPDPTMDPAFVTQMQALCPQNGDGTRRVGLDTGSVGRFDTTFFSNLRNGRGVLESDQKLWTDASTRTFVQRFLGLRGVLGLTFNLEFGRSMVKMSNIEVKTGNQGEIRKVCSAVN | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1843010 | 1845179 | - | MELO3C018656.2.1 | Cme01g00253 | 317229 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 39 | 58 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 63 | 83 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 99 | 112 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 118 | 128 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 137 | 152 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 183 | 195 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 242 | 257 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 258 | 275 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Plant peroxidase signature | 302 | 315 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | CDD | secretory_peroxidase | 31 | 327 | IPR033905 | GO:0004601|GO:0042744 | |
Cme01g00253 | 328 | Pfam | Peroxidase | 46 | 285 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | ProSiteProfiles | Plant heme peroxidase family profile. | 29 | 328 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PANTHER | PEROXIDASE 25-RELATED | 11 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | SUPERFAMILY | Heme-dependent peroxidases | 31 | 328 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Haem peroxidase superfamily signature | 61 | 75 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Haem peroxidase superfamily signature | 119 | 136 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Haem peroxidase superfamily signature | 137 | 149 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Haem peroxidase superfamily signature | 184 | 199 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | PRINTS | Haem peroxidase superfamily signature | 244 | 259 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cme01g00253 | 328 | Gene3D | Peroxidase, domain 2 | 162 | 307 | - | - | |
Cme01g00253 | 328 | ProSitePatterns | Peroxidases active site signature. | 61 | 72 | IPR019794 | GO:0004601 | |
Cme01g00253 | 328 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 184 | 194 | IPR019793 | - | |
Cme01g00253 | 328 | PANTHER | PEROXIDASE | 11 | 326 | - | - | |
Cme01g00253 | 328 | Gene3D | - | 33 | 328 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g00253 | Cme-Chr1:1843010 | Cme02g01208 | Cme-Chr2:17409595 | 1.14E-128 | dispersed | |
Cme02g01212 | Cme-Chr2:17452736 | Cme01g00253 | Cme-Chr1:1843010 | 7.49E-51 | dispersed | |
Cme12g00667 | Cme-Chr12:12219444 | Cme01g00253 | Cme-Chr1:1843010 | 8.63E-42 | dispersed | |
Cme01g00251 | Cme-Chr1:1839547 | Cme01g00253 | Cme-Chr1:1843010 | 1.05E-67 | proximal | |
Cme01g00252 | Cme-Chr1:1841521 | Cme01g00253 | Cme-Chr1:1843010 | 9.98E-53 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme01g00253 | K00430 | - | csv:101217567 | 617.846 |