Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00270 ATGGCTAAGTTGATGGTTCTTCTCAATCTCTTGTTATTCCTTGGTTGCTTTGCTTCCATTTCTCAAGGCCAATTGCAATTTGGATTCTATGCTCAATCTTGTCCTAACGCCAAATCCATCGTTCGTTCCGTTGTGAACGACGCCATTCGAAATGATGCCACCATGGCTGCTGTATTGCTCCGCCTCCATTTTCACGATTGCTTTGTAGAGGGTTGCGATGGTTCGATCTTGGTCGACAATGGGGCAAGGTCTGAGAAACTTGCTTTCGGGCATCAAGGAGTGCGGGGGTTTGATGTAATAGAAAGAGCCAAGAGAGAACTGGAAACACGATGTCCTGGAATTGTTTCTTGTGCTGATATCGTAGCTATGGCTGCTAGAGATGCCATTGTTTCGGCAAATGGGCCGGACTACGATATTCCAACCGGACGGAGAGACGGTAGAGTTTCGGATGTATCTCTGGCGAGTGAGCTGCCGGATGTGAGTGATTCAATTGACGTTTTGAAGAGGAAATTTGCAGAGAAAGGGATGAATGAAAAGGACTTGGTTTTACTAACAGCTGCCCACACAATCGGAACCACCGCATGCTTCTTCATGACAAATCGCCTCTACAGCTTCCCGGGCGGGGGGTCGGACCCGAGCATAAACCCGGCGCTGCTACCGGAGCTACAGTCGCAATGTCCTAGAAATGGCGACGTGAATGTCCGACTTGGCATCGACCGTGGCAGTCCGGGCAAATTCGACATCAGCATTCTTCAAAACATAAGAAACGGCTTTGCCGTCCTCGCCTCCGATGCTAGTCTAAACGACGACCCATCGACCCGAGCCATCATGGACTCGTACTTTAGCCCTCTTTCCCCCATTCTTGGCCCCTCATTTCAACGTGATTTTATCAACTCCATTTTGAGAATGGGGCAGATTGGGACTAAAACTGGCTCTCAAGGAGAGATTCGAAGGGTTTGTTCTGCTTTTAACTAA 975 48.82 MAKLMVLLNLLLFLGCFASISQGQLQFGFYAQSCPNAKSIVRSVVNDAIRNDATMAAVLLRLHFHDCFVEGCDGSILVDNGARSEKLAFGHQGVRGFDVIERAKRELETRCPGIVSCADIVAMAARDAIVSANGPDYDIPTGRRDGRVSDVSLASELPDVSDSIDVLKRKFAEKGMNEKDLVLLTAAHTIGTTACFFMTNRLYSFPGGGSDPSINPALLPELQSQCPRNGDVNVRLGIDRGSPGKFDISILQNIRNGFAVLASDASLNDDPSTRAIMDSYFSPLSPILGPSFQRDFINSILRMGQIGTKTGSQGEIRRVCSAFN 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2003894 2009075 - MELO3C018672.2.1 Cme01g00270 317246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00270 324 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Cme01g00270 324 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Cme01g00270 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cme01g00270 324 PANTHER PEROXIDASE 12 322 - -
Cme01g00270 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cme01g00270 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 PANTHER PEROXIDASE 25-RELATED 12 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00270 324 Gene3D - 28 324 - -
Cme01g00270 324 Gene3D Peroxidase, domain 2 158 303 - -
Cme01g00270 324 Pfam Peroxidase 41 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00270 Cme-Chr1:2003894 Cme02g01208 Cme-Chr2:17409595 9.24E-95 dispersed
Cme01g00270 Cme-Chr1:2003894 Cme11g00772 Cme-Chr11:9621554 3.12E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00270 K00430 - csv:101221831 589.341