Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00300 ATGGAAGATTCCTCACACCAGTCATCGGTGTTTCAGAAGATATGTGGCCATTCTTACCTCACTTCTAGACTCTCCCCTGACCTTCACTCCACACGGCTGACCGGTGTATTTGCTAATGGTGTTTTGGAGAATCCCTTGAAGACAGCTTATCATGGGACTGGCTTGGTTGGAGTTTCACCCACTTCTCCTTTTCTGGTACAAGCTCCTTCTGAGAAAGGTGCAGCTGGCTTTGCCGTGGATTTTCTTATGGGAGGAGTATCTGCTGCTGTTTCTAAAACAGCTGCTGCTCCAATTGAGCGTGTCAAATTGCTGATCCAAAATCAGGATGAGATGCTTAAGACTGGTAGGCTATCTGAGCCATACAAAGGAATCACCGACTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATATCTCTATGGAGGGGAAATACTGCAAATGTTATCAGATACTTCCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCCTCTGGTGGTGCTGCTGGTGCTTCATCTCTTTTATTCGTTTATTCCCTTGATTATGCTAGAACTCGTCTGGCCAATGATGCTAAGGCTGCTAAAAAGGGTGGCGAGAGGCAGTTTAATGGTCTTGTTGACGTTTACAAGAAAACCCTTAAATCCGATGGCATTGCTGGGCTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATTGTGTACCGTGGTCTTTACTTTGGAATGTATGATTCAATGAAGCCCGTAGTTTTGGTTGGTGATTTGCAGGATAGTTTCCTTGCTAGTTTCTTGCTTGGTTGGTGTATCACGATAGGAGCTGGTTTGGCTTCTTACCCAATCGATACTGTCCGCAGAAGAATGATGATGACCTCAGGCGAAGCAGTCAAATATAATAGCTCATTGGATGCATTCAAACAGATCGTTAAGAATGAGGGAACCAAATCTCTCTTCAAGGGTGCTGGGGCAAACATTCTACGTGCTGTTGCCGGTGCTGGTGTGTTGGCTGGTTACGATAAGCTTCAGCTCCTTGTTCTTGGCAAGAAATATGGTTCGGGTGGTGGTGGTTAA 1137 44.77 MEDSSHQSSVFQKICGHSYLTSRLSPDLHSTRLTGVFANGVLENPLKTAYHGTGLVGVSPTSPFLVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGITDCFARTIKDEGVISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSMKPVVLVGDLQDSFLASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGGG 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2245551 2248895 - MELO3C018705.2.1 Cme01g00300 317276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00300 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 168 IPR018108 -
Cme01g00300 378 Pfam Mitochondrial carrier protein 76 172 IPR018108 -
Cme01g00300 378 Pfam Mitochondrial carrier protein 179 272 IPR018108 -
Cme01g00300 378 Pfam Mitochondrial carrier protein 281 367 IPR018108 -
Cme01g00300 378 PRINTS Mitochondrial carrier protein signature 80 93 IPR002067 GO:0055085
Cme01g00300 378 PRINTS Mitochondrial carrier protein signature 93 107 IPR002067 GO:0055085
Cme01g00300 378 PRINTS Mitochondrial carrier protein signature 143 163 IPR002067 GO:0055085
Cme01g00300 378 PRINTS Mitochondrial carrier protein signature 195 213 IPR002067 GO:0055085
Cme01g00300 378 PRINTS Mitochondrial carrier protein signature 245 263 IPR002067 GO:0055085
Cme01g00300 378 PRINTS Mitochondrial carrier protein signature 289 311 IPR002067 GO:0055085
Cme01g00300 378 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 23 377 - -
Cme01g00300 378 PRINTS Adenine nucleotide translocator signature 77 89 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme01g00300 378 PRINTS Adenine nucleotide translocator signature 121 142 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme01g00300 378 PRINTS Adenine nucleotide translocator signature 154 166 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme01g00300 378 PRINTS Adenine nucleotide translocator signature 180 193 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme01g00300 378 PRINTS Adenine nucleotide translocator signature 285 301 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme01g00300 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 180 272 IPR018108 -
Cme01g00300 378 Gene3D Mitochondrial carrier domain 78 373 IPR023395 -
Cme01g00300 378 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 23 377 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme01g00300 378 SUPERFAMILY Mitochondrial carrier 76 362 IPR023395 -
Cme01g00300 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 284 366 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00300 Cme-Chr1:2245551 Cme03g02060 Cme-Chr3:28073563 0 dispersed
Cme01g00300 Cme-Chr1:2245551 Cme08g02449 Cme-Chr8:31357978 5.56E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00300 K05863 - csv:101212128 705.671