Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00303 TCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTAGTCTCTACTACTCAACTTCTCCCAATAATTCGATCTGTTCAACAAATTTTACAAACCCCAATGACAACCGGAAGAGAAATTCTCCACAAGATGAAGGTGAAGGCAGGGTTTTGTAGTTCATCGGCAGCGGAAACAGGAGGGAAAGGGAAAGGGAAAGTAACGGCAAAGAATAGTAATAATAATAATGTAAGCTATGGGAGTTATTTGGTGAAGGGAAAAGCCAACCATCCAATGGAAGATTATTTAGTCACCGATTTCAAGAGAGTCAAAGAACATGATTTGGGTTTGTTTGCTATTTTTGATGGACATTTGGGACATGATGTTGCTAATTTCTTGCAAAACAATCTCTTTGATAACATCCTTAAACAGGGTGATTTGTGGAGCGAAACAAGAAAGGCAATAAAAAGAGCATACAAGAAAACAGACGAAGAAATATTGGATAAAGTGAAGCAACTCGGAAAAGGAGGATCAACGGCTGTAACCGCCATCTTGATCGACGCTCACAAACTTGTGGTTGCCAACGTCGGAGATTCTAGAGCTGTTTTGTGCAAAAACGGCGTCGCCTACCAACTTTCCGTTGACCATGAACCCACTAAAGAGAAAAGAGAAATTGAAAGCCGTGGTGGTTTTGTGTCAAACATTCCAGGTGATGTTCCACGTGTCGATGGACAATTGGCAGTTGCCAGAGCATTCGGCGATAAGAGCTTAAAAATCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTTGACGAAACTACGGAGTTCATGATCTTGGCTAGCGACGGCATATGGAAGGTCATGACAAATCAAGAGGCCGTAGAATCAATTAGGCATATAAAGGATGCGAACGTAGCTGCAAAACGACTTATCGACGAAGCAGTTTCTAGGAGAAGCACGGATGACATATCATGCATTGTTGTTAGGTTTCGATGA 975 42.36 SLSLSLSLSISLVSTTQLLPIIRSVQQILQTPMTTGREILHKMKVKAGFCSSSAAETGGKGKGKVTAKNSNNNNVSYGSYLVKGKANHPMEDYLVTDFKRVKEHDLGLFAIFDGHLGHDVANFLQNNLFDNILKQGDLWSETRKAIKRAYKKTDEEILDKVKQLGKGGSTAVTAILIDAHKLVVANVGDSRAVLCKNGVAYQLSVDHEPTKEKREIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKIHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNQEAVESIRHIKDANVAAKRLIDEAVSRRSTDDISCIVVRFR 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2267534 2269300 + MELO3C018708.2.1 Cme01g00303 317279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00303 324 Gene3D - 59 324 IPR036457 -
Cme01g00303 324 SMART PP2C_SIG_2 81 323 IPR001932 -
Cme01g00303 324 ProSiteProfiles PPM-type phosphatase domain profile. 76 323 IPR001932 -
Cme01g00303 324 PANTHER PROTEIN PHOSPHATASE 2C 35 323 IPR015655 GO:0004722|GO:0006470
Cme01g00303 324 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 35 323 - -
Cme01g00303 324 Pfam Protein phosphatase 2C 86 316 IPR001932 -
Cme01g00303 324 CDD PP2Cc 75 323 IPR001932 -
Cme01g00303 324 SUPERFAMILY PP2C-like 69 323 IPR036457 -
Cme01g00303 324 SMART PP2C_4 72 321 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00303 Cme-Chr1:2267534 Cme07g00584 Cme-Chr7:5037343 2.99E-130 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00303 K17506 - csv:101211399 534.643