Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme01g00305 | ATGAAGCGTTATGTTTACATCAACGACAACGAACCATCAAATGATCTTTATTGCGATAACCGCATTTCGAACCGGAAATACACATTATTGAACTTTCTCCCAAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAACCAATATTTTTTGTTAATTGCGTGCCTACAGTTGTGGCCACTTATAACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTCATTTTTGCCGTGTCGGCAACAAAAGAGGCGTGGGATGATTATAATAGATATTTGTCAGACAAAAAAGCAAATGAGAAGGAAGTTTGGGTTGTGAAGCAGGGTACCAGAAAAATTATTCAAGCACAAGATATTCATGTTGGTAACTTGGTATGGCTCAGGGAGAATGATGAAGTGCCTTCTGATCTTGTTTTGATTGGTACATCTGATCCTCAAGGAATTTGCTATGTAGAGACATCTGCCCTTGATGGAGAAACTGACTTGAAGACAAGGGTCATACCCTCAGCTTGCATGGGAATCGATTTTGATCTGTTAAACAAGATCAAGGGAGTTATCGAGTGTCCTAAACCAGATAAGGATATTAGAAGATTTGATGCAAACATTCGGTTATTTCCTCCTTTTATCGACAATGATGTGTGTCCTTTAACAATAAAAAACACAATTCTTCAGTCATGTTACTTGCGGAACACAGATTGGGTCTGTGGAGTAGCTGTCTACACAGGCAATGAAACCAAGCTTGGAATGAGCAGGGGTGTCCCAGAACCAAAACTTACAGCTATGGATGCAATGATCGACAAGTTAACTGGTGCTATATTTGTTTTCCAACTTGTGGTTGTTGTTGTTCTGGGTATAGCTGGCAATGTTTGGAAGGATTCTGAAGCTCGCAAGCTATGGTATGTGCAACATCCAGAGGAAGGCCCATGGTATGAGCTTTTGGTTATCCCTCTTCGGTTTGAGCTTCTTTGTTCAATCATGATACCTATTTCAATTAAGGTATCTCTGGATCTTGTTAAGAGCTTGTATGCAAAATTTATTGATTGGGACTATGATATGGTTGACTGTGAGAGTGGTATTCCTTCCCATGCTACGAATACAGCAATAAGTGAGGACCTGGGTCAAGTTGAATACATTTTGACAGATAAAACCGGTACTCTCACTGAAAATAAGATGATCTTCAGGAGATGTTGTATCAATGGCATTTTTTATGGAAATGAAAATGGAGATGCCTTGAAAGATAAAAAATTGGTCAATGCCATTGCAAACAGCTCTCCGGATGTTTTAAGATTTCTCACAATTATGGCAATATGTAATACAGTGGTGCCTACGAAAAGCAAAAGTGGAAATATCTTGTACAAGGCACAGTCACAGGATGAGGATGCTCTTGTGAATGCTGCTGCTTATTTGCATATGGTATTTGTCAATAAGAGTGCTAATATTCTTGAAATTCAGTTTAATGGAATGCTGAATAGATATGAGCTCCTCGATACTCTGGAATTCACATCTGAACGAAAAAGAATGTCTGTGGTCGTTAAAGATTGTCAGAATGGGAAGATTGTTCTCCTGTCTAAAGGAGCAGATGAAGCTATACTTCCTTATGCTTATGCGGGCCAGCAAACAAGAACATTTATTGAAGCCGTGGATCAATATGCACAACTGGGTCTCCGCACATTATGTTTGGCTTGGCGTGAACTGGAGGAAGAGGAGTATCGAGAATGGGCTTTTATGTTTAAGGAGGCTAATAGCACACTGGTTGACAGGGAGTGGAGGTTAGCTGAAGTTTGTCAAAGATTAGAGCGAAATTTTGAAGTCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGCGTCCCTGAAACAATTGAAACATTGAGAAGAGCAGGAATAAATTTCTGGATGCTGACCGGAGACAAGCAGAACACTGCCATTCAGATAGCTCTTTTATGCAACTTTATTTCACCAGAGCCCAAAGGACAGTTATTATTAATAGATGGAAAAACGGAGGATGAAGTTTGCAGAAGTTTGGAGAGAGTTGTCCTAACTATGAGGACCACAACCTCAGAGCCCAAGGATGTTGCTTTTGTTGTTGATGGCTGGGCTCTTGAAATTGCTCTCAAGAATTATCGTAGGGCTTTCACTGAATTAGCAATACTATCAAGAACTGCAATATGTTGTCGTGTGACACCATCACAGAAGGCTCAGCTTGTAGAACTCTTAAAATCGTGTGATTATAGAACACTGGCAATTGGAGATGGTGGGAATGATGTGAGGATGATACAGCAAGCTGATATTGGAGTTGGCATTAGTGGAAGAGAAGGACTGCAGGCAGCCAGGGCAGCTGATTATAGTATTGGAAAGTTCAGGTTTCTGAAAAGATTGATTCTAGTTCATGGACGATACTCGTACAACCGTACAGCATTCTTGTCGCAATATTCATTCTATAAATCCTTGTTGATATGTTTTATCCAGATCTCTTTCTCTTTCATATCAGGTGTCTCTGGGACCAGTCTCTTTAATTCTGTTAGCCTGATGGCTTACAATGTTTTCTATACTAGTATTCCAGTATTAGTTAGCGTTCTTGACAAAGATCTCAGTGAAGAAACGGTGATGCAACATCCTCAGATTTTGTTTTACTGCCAAGCTGGGAGGATTTTAAATCCCAGCACATTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCTGTTGTCGTGTTTGTAATTAGCATACATGCCTACGCTAATGAAAAGAGCGAAATGGTGGAAGTCTCAATGGTGGCACTATCTGGGTGCATTTGGTTACAAGCTTTTGTAGTGACTTTGGAGACCAATTCATTCACAATATTGCAGCATCTTGCCATATGGGGGAATTTAGCTGCATTTTACGTAATCAATTGGATCTTCAGCGCCATTCCTTCATCGGGAATGTACACAATCATGTTTCGCTTATGCGGACAACCTTCATATTGGATAACCATATTTCTAATAGTAGGAGTTGGGATGGGCCCACTTTTAGCAATCAAATACTTCAGATATACATACACACCAAGCAAAATCAACACACTTCAACAAGCTGAACGTTTGGGTGGGCCGATTCTGTCGCTAAAAAACATCGAGCATCAGCCTCGGCCCATTGAGAAAGAAGTTTCTCCAATCTCAATTACTCAGCCCAAAAATAGAAATACAGTTTACGAACCTTTGTTATCAGACTCTCCAACTGCCACTCGAAGATCTCTTGCTTCTTCTTCTTCCTCCTTTGATTTCTTTCAGACACCCCCAAGTAGTTATTCAAGAAATAAGGATAATTAG | 3309 | 40.28 | MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIHVGNLVWLRENDEVPSDLVLIGTSDPQGICYVETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVYTGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWYVQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYDMVDCESGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAIANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSANILEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLLSKGADEAILPYAYAGQQTRTFIEAVDQYAQLGLRTLCLAWRELEEEEYREWAFMFKEANSTLVDREWRLAEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLERVVLTMRTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTILQHLAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYTPSKINTLQQAERLGGPILSLKNIEHQPRPIEKEVSPISITQPKNRNTVYEPLLSDSPTATRRSLASSSSSFDFFQTPPSSYSRNKDN | 1102 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2276988 | 2287835 | - | MELO3C018710.2.1 | Cme01g00305 | 317281 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme01g00305 | 1102 | PRINTS | P-type cation-transporting ATPase superfamily signature | 152 | 166 | - | - | |
Cme01g00305 | 1102 | PRINTS | P-type cation-transporting ATPase superfamily signature | 379 | 393 | - | - | |
Cme01g00305 | 1102 | PRINTS | P-type cation-transporting ATPase superfamily signature | 628 | 638 | - | - | |
Cme01g00305 | 1102 | PRINTS | P-type cation-transporting ATPase superfamily signature | 750 | 769 | - | - | |
Cme01g00305 | 1102 | Pfam | Cation transport ATPase (P-type) | 436 | 532 | - | - | |
Cme01g00305 | 1102 | Gene3D | - | 602 | 790 | IPR023214 | - | |
Cme01g00305 | 1102 | Gene3D | - | 75 | 251 | - | - | |
Cme01g00305 | 1102 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 717 | 834 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cme01g00305 | 1102 | Pfam | E1-E2 ATPase | 99 | 293 | - | - | |
Cme01g00305 | 1102 | SUPERFAMILY | HAD-like | 374 | 805 | IPR036412 | - | |
Cme01g00305 | 1102 | SFLD | C1.7: P-type atpase like | 362 | 801 | - | - | |
Cme01g00305 | 1102 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 422 | 1023 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cme01g00305 | 1102 | Pfam | Phospholipid-translocating ATPase N-terminal | 5 | 70 | IPR032631 | - | |
Cme01g00305 | 1102 | Gene3D | - | 445 | 581 | IPR023299 | GO:0000166 | |
Cme01g00305 | 1102 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 385 | 1099 | - | - | |
Cme01g00305 | 1102 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 12 | 330 | - | - | |
Cme01g00305 | 1102 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 16 | 1016 | IPR023298 | - | |
Cme01g00305 | 1102 | SFLD | p-type atpase | 362 | 801 | IPR044492 | - | |
Cme01g00305 | 1102 | SUPERFAMILY | Calcium ATPase, transduction domain A | 100 | 248 | IPR008250 | - | |
Cme01g00305 | 1102 | MobiDBLite | consensus disorder prediction | 1058 | 1102 | - | - | |
Cme01g00305 | 1102 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 381 | 387 | IPR018303 | - | |
Cme01g00305 | 1102 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 12 | 330 | - | - | |
Cme01g00305 | 1102 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 385 | 1099 | - | - | |
Cme01g00305 | 1102 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 386 | 573 | IPR023299 | GO:0000166 | |
Cme01g00305 | 1102 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 778 | 1017 | IPR032630 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g00305 | Cme-Chr1:2276988 | Cme08g02098 | Cme-Chr8:26574399 | 0 | dispersed | |
Cme12g01907 | Cme-Chr12:25173585 | Cme01g00305 | Cme-Chr1:2276988 | 1.02E-23 | dispersed | |
Cme01g00305 | Cme-Chr1:2276988 | Cme10g00310 | Cme-Chr10:2035551 | 7.52E-163 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme01g00305 | K01530 | - | csv:101210900 | 2114.73 |