Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00315 ATGGCGTCTATTATTTCTCATCTTTTCATTGTTCTTTCTCTTTTAGCTTTTTCGGCCAATGGTCAACTCTCCTCTGGTTTCTACTCGAAAAGTTGTCCTAGACTTGAATCTATTGTTCGTGCTGGTATGACTAAAGCTGTTAACAAAGAAAAACGTATGGGAGCTTCGATCCTTCGCTTGTTCTTCCACGATTGCTTCGTTAATGGTTGTGATGGTTCTATATTGCTCGATGACACTCCAACAGTTAGGGGTGAAAAAAATGCATTTCCAAATAGGAACTCTGCTAGAGGGTTCGAAGTAATTGATGACATTAAAACTCAAGTTGAAGCTGCTTGCAATGCAACAGTTTCATGTGCTGATATTCTTGCTTTGGCCACTCGTGATGGGGTCGTTTTGCTTGGAGGACCAAGTTGGGTTGTACCACTTGGTCGAAGGGACTCGAGGACAGCGAGCGAGACTGGAGCAAACAACAACCTTCCAGGACCATCGTCCGACCTCTCAACACTAATATCAATGTTTGCCGCTCAAGGTTTCAACGCCCGTGAAATGACAACCCTCTCGGGTGCTCACACCATAGGCGTGGGCCAATGTCAATTCTTCCGAACTCGCATCTATAACGAAACCAACATCGATGGCACCTTTGCCGCCCAACGACGAGTCAATTGCCCATTTAACGGTGGTGACAGCAACTTAGCCCCTCTTGACTCAACTAATACCATGTTTGACAACAGATATTATGTTGACTTAACTAATAAGCGCGGTCTGTTTCATTCTGACCAAGAACTCTTCAATGGTGGTTCACAAGATGCGTTGGTTCGGACCTATAGTACAAATCCCAATATGTTTAAATCGGATTTTGTAAAGGCAATGATCAAGATGGGGAATCTTAGTCCTGCAAGTGGAACAGCCACTGAGATTAGAAAAAATTGTAGGGTAGTGAATTAA 945 43.6 MASIISHLFIVLSLLAFSANGQLSSGFYSKSCPRLESIVRAGMTKAVNKEKRMGASILRLFFHDCFVNGCDGSILLDDTPTVRGEKNAFPNRNSARGFEVIDDIKTQVEAACNATVSCADILALATRDGVVLLGGPSWVVPLGRRDSRTASETGANNNLPGPSSDLSTLISMFAAQGFNAREMTTLSGAHTIGVGQCQFFRTRIYNETNIDGTFAAQRRVNCPFNGGDSNLAPLDSTNTMFDNRYYVDLTNKRGLFHSDQELFNGGSQDALVRTYSTNPNMFKSDFVKAMIKMGNLSPASGTATEIRKNCRVVN 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2354226 2356487 - MELO3C018719.2.1 Cme01g00315 317291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00315 314 SUPERFAMILY Heme-dependent peroxidases 22 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 CDD secretory_peroxidase 22 313 IPR033905 GO:0004601|GO:0042744
Cme01g00315 314 PANTHER PEROXIDASE 72-RELATED 15 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 Gene3D - 27 311 - -
Cme01g00315 314 Gene3D Peroxidase, domain 2 160 293 - -
Cme01g00315 314 PANTHER PEROXIDASE 15 314 - -
Cme01g00315 314 ProSiteProfiles Plant heme peroxidase family profile. 22 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 Pfam Peroxidase 39 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Cme01g00315 314 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme01g00315 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00315 Cme-Chr1:2354226 Cme02g00215 Cme-Chr2:1735029 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00315 K00430 - csv:101208932 588.571