Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00322 ATGGCTTCCACTAAAGAACGCGACAACTTCGTTTACATCGCTAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTGGATGTCGAATTGACAGTAGAAGAAAGAAACTTACTTTCTGTTGGATACAAGAATGTGGTTGGTGCACGGAGAGCCTCGTGGAGGATATTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAGCAAATGCTAAACGCATCAAAGAATACAGACAAAAGGTTGAATCGGAGCTCTCTGGTATTTGCAATGATATCATGATGGTGATTGACGAGCACCTGATTCCATCGGCTTCAGCTGGGGAATCAACAGTATTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACCAGCTCAGCCGAATCCGAGTTACCCCCTACACATCCTATCCGCTTGGGGTTGGCATTAAATTTCTCTGTCTTCTATTACGAAATTTTGAATTCACCTGGAAGGGCCTGTGACCTTGCAAAGCAAGCTTTTGATGAAGCCATTTCTGAACTTGACACCCTGAATGAAGAGTCATACAAAGATAGCACCTTGATCATGCAGCTTCTTAGGGACAACCTTACATTATGGACTTCTGACATCACAGAAGATGGAGATGATGCCCAAAAGATCAATGGAACTGCCAAGGCTCCCGGTGGTGACGATGCCGAGTGA 786 43.38 MASTKERDNFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKEYRQKVESELSGICNDIMMVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPGRACDLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDITEDGDDAQKINGTAKAPGGDDAE 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2433085 2436873 + MELO3C018726.2.1 Cme01g00322 317298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00322 261 Coils Coil 13 33 - -
Cme01g00322 261 Gene3D - 1 249 IPR036815 -
Cme01g00322 261 Coils Coil 195 215 - -
Cme01g00322 261 MobiDBLite consensus disorder prediction 241 261 - -
Cme01g00322 261 PANTHER 14-3-3 PROTEIN 4 260 IPR000308 -
Cme01g00322 261 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Cme01g00322 261 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Cme01g00322 261 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Cme01g00322 261 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Cme01g00322 261 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Cme01g00322 261 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Cme01g00322 261 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Cme01g00322 261 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Cme01g00322 261 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Cme01g00322 261 SMART 1433_4 7 248 IPR023410 -
Cme01g00322 261 Pfam 14-3-3 protein 14 235 IPR023410 -
Cme01g00322 261 PIRSF 14-3-3 1 247 IPR000308 -
Cme01g00322 261 PANTHER 14-3-3-LIKE PROTEIN D ISOFORM X1 4 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00322 Cme-Chr1:2433085 Cme10g00363 Cme-Chr10:2337132 5.00E-143 dispersed
Cme01g00322 Cme-Chr1:2433085 Cme03g01863 Cme-Chr3:26886991 4.89E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00322 K06630 - csv:101208446 494.582