Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00326 ATGTCTTCTTCGTCCTTTCTTTTCTGCGCCGTTACCTCGATTCTATTATCCATTTCCACCTCTGTTTCTGCTACAGAGTTTGTCTTCAACACCAATTTCACTTCCACCAATACTTTGCTCTTCGGCAACGCCACCATTGATTCTTCCGTTCTTATTCTCACTAGAGATTCCCCTTTCACCATCGGCCGTGCTCTTTACCCTTTCAAAATTCCCATCCATTTCTCCAATTCTTCATTTTCCTTTGCATCTTCTTTCATTTTCTCTGTTGCCCCTCAACCAAATCTTCTCCCTGGTCATGGATTTGCTTTTCTCTTCACACCCTTTACTGGAATCAACGGAACTAGCTCAGCTCAGAATTTGGGGCTTTTCAATTTCACCAATAATGGCAGCCCCAATAACCATGTCTTCGCTGTTGAGTTCGATTCGTTTCAAAATTTGGAGTTCAATGACCCCAATGATAACCATGTGGGTGTGGATTTGAATTCTCTTGAATCTAATGCTTCCTTTGCAGCAGGGTTTTGGAGAGGACCTGATGATGGAGAATTCAAGGAATTGAAGATCAATAATGGAGAAACTTATCAGGTTTGGATTGAATGTCTTGATTCTTTAGTTAATATCACAATGGCTGAAGTGGGAATGAAAAGGCCTAGAAAACCATTGATATCTGTATTTGTTGATTTCCCTGGATTGCTTTTGGATGAGATGTATGTAGGATTTACAGCAGCCACTGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGTTTTAGTACCTCCAATTTGTCTATAGGTGATGCTTTGTTGATAACAGATTTACCGTCATTTGTTCCTCAAAAAGAGGGCTCCATTTTTAACTCAAGAGCTTTCGTATTGGGAATAACTTTGGGGGGTGTTGGACTTAAGGGGAAGAAAAAAACCAAAGGATGA 930 40.22 MSSSSFLFCAVTSILLSISTSVSATEFVFNTNFTSTNTLLFGNATIDSSVLILTRDSPFTIGRALYPFKIPIHFSNSSFSFASSFIFSVAPQPNLLPGHGFAFLFTPFTGINGTSSAQNLGLFNFTNNGSPNNHVFAVEFDSFQNLEFNDPNDNHVGVDLNSLESNASFAAGFWRGPDDGEFKELKINNGETYQVWIECLDSLVNITMAEVGMKRPRKPLISVFVDFPGLLLDEMYVGFTAATGQLVQSHKILSWSFSTSNLSIGDALLITDLPSFVPQKEGSIFNSRAFVLGITLGGVGLKGKKKTKG 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2465318 2467437 - MELO3C018730.2.1 Cme01g00326 317302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00326 309 CDD lectin_legume_LecRK_Arcelin_ConA 25 260 IPR001220 GO:0030246
Cme01g00326 309 Pfam Legume lectin domain 25 261 IPR001220 GO:0030246
Cme01g00326 309 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 262 IPR013320 -
Cme01g00326 309 Gene3D - 23 268 - -
Cme01g00326 309 PANTHER - 23 299 - -
Cme01g00326 309 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.2-RELATED 23 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00326 Cme-Chr1:2465318 Cme12g01344 Cme-Chr12:21440636 1.64E-96 dispersed
Cme01g00326 Cme-Chr1:2465318 Cme08g02424 Cme-Chr8:31130143 1.41E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00326 - - csv:101216388 516.538