Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00330 ATGGAGGAATCTCTTCTAGGAGGAGGAGGAGGAGGAGGAGAAAGTAGCGGTAGTTCCACCTCTCGACGTCAGACTCCGCATGTCAGGTTCCGGCGCCGCTCCGACGCCATCGCTTATGGCTCTGCCTACCAGAGAGCGGCTGCTCTTGTGGATCTGGCTGAAGATGGCGTTGGTATACCCGAGAAAATTCTTGATCAGTCAAACTTTCAGAGTGCTGCAAAGCTCTATTTCATTTTTATTAAATTTGATTGGATTTGGTCCTTAAATTTCTTTGCGCTAATAGTCCTAAATTTCTTTGAGAAACCCTTGTGGTGCTCCAAATACGATACTCATTCTTGTAACGACAGGGAGTATTTCTTTCTTGGACAGTTGCCGTACTTAACAGCTGTTGAATCTCTTATATATGAGGCTGTGACTCTCATAATACTCATGATACACACTTTTTTCCCAATTTCATATGAAGGTGCCCAGCTTTATTGGACCAATCTCCTGAATCAGTTGAAGGTCATTTGCATAATTATTTTGGTTGCCGATTTTCTCGTTTATACCCTATATTTGTCACCAGTGGCCTTTGATTATCTTCCATTCAGAGCTGCACCATATATCAGAGTTATCTTTTTCATCATGAATATCAGGCATCTACGGGAGAGCATTATCATCCTGGCTGGAATGCTTGGCACATACTTGAATGTCTTGGCTCTATGGTTTTTGTTTCTTTTGTTTTCCAGCTGGTTGGCATATGTTATTTTTGAGGATACACAGCAGGGGAAATTAATATTTACTTCTTTTGGAACCACATTATATCAAATGTTTATTTTGTTCACAACATCAAATAATCCGAACGTTTGGATACCTGCCTACAAGGCATCTCGTTGGTATTGCCTCTTTTTTGTGCTTTACGTGCTGTTGGGTGTTTACTTCGTTACAAACTTGATTCTTGCTGTTGTATACGATAGCTTTAAGAGTCAGCTTGCTAAACAAATTTCTGAGATGGATCGCTTGAGGAAAAGTATATTGGCCAAAGCATTTAGTCTCATGGATACAAATAACGTTGGGTTTATCAATAAGGAGCAGTGCCTTATGCTTCTTGAAGAACTTAACAGATACAGGACATTGCCGAAAATATCAAGGGATGATTATGAGTTAATATTTGATGAGCTGGATGACAGTCGTGATTTTAAGATTAATATCAATGAGTTTGATGACCTTTGCAACGCTATAGCCTTGAAGTTCCAGAAGGAGGACATTCCTTCATGGTTTGAAGGGTATCCTTCGATCTACCATTCAAGTTTTTCAAAAAAGTTGAAAGCATTTGTGCGGAGTCCCAAATTTGGATATGCTGTATCTTTTATCCTCATACTGAACTTGGTTGCTGTTATTATTGAAACAACACTTGATATAGAAAACAACGTAGGTCAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGATATATGTAGTTGAAATGGCTCTAAAAATCTACGCGTATGGATTTATGAATTATTGGAGAGATGGGCAAAATCAATTTGATTTCCTTATCACGTGGATTATAGTGATTGGAGAAACTATAACTTTTGTGGCACCGAGTGGATTGACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTCTGATAGCGAGAATGTTACGTCTCATAAGGCTCCTAATGCATGTCCGGCAATATCGAGCATTTCTTGCTACCTTCTTAACTCTCATCCCTAGTTTGATGCCGTATCTAGGGACTATTTTCTGTGTCCTCTGTCTTTATTGCACTCTTGGTGTGCAGGTCTTTGGAGGTATTGTCAATGCCGGAAATCCTACTTTGCCTAAGACGGATTTGGACGATGATGACTACCTACTTTTCAATTTCAACGACTATCCTAATGGCATGGTGACCCTTTTCAATTTGCTAGTTATGGGAAACTGGCAAGATTGGATGCAGAGCTACAAGGAATTAACCGGAAGTATTTGGAGCCTTGTTTATTTCATCAGTTTCTACCTAATAACCGTTTTGCTGCTCTTAAATCTGGTTGTAGCTTTTGTCCTAGAGGCATTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGTGAAGAACAGGACCAGGACAGCGATAGTAGAAAGGATCGTCCACGTTTCGTTGGCACTAAAACTCGGAGCCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCAGAATTGGGCGAAAAGGATTCCGATTAG 2232 40.01 MEESLLGGGGGGGESSGSSTSRRQTPHVRFRRRSDAIAYGSAYQRAAALVDLAEDGVGIPEKILDQSNFQSAAKLYFIFIKFDWIWSLNFFALIVLNFFEKPLWCSKYDTHSCNDREYFFLGQLPYLTAVESLIYEAVTLIILMIHTFFPISYEGAQLYWTNLLNQLKVICIIILVADFLVYTLYLSPVAFDYLPFRAAPYIRVIFFIMNIRHLRESIIILAGMLGTYLNVLALWFLFLLFSSWLAYVIFEDTQQGKLIFTSFGTTLYQMFILFTTSNNPNVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRLRKSILAKAFSLMDTNNVGFINKEQCLMLLEELNRYRTLPKISRDDYELIFDELDDSRDFKININEFDDLCNAIALKFQKEDIPSWFEGYPSIYHSSFSKKLKAFVRSPKFGYAVSFILILNLVAVIIETTLDIENNVGQKAWQELEFVFGWIYVVEMALKIYAYGFMNYWRDGQNQFDFLITWIIVIGETITFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVRQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGIVNAGNPTLPKTDLDDDDYLLFNFNDYPNGMVTLFNLLVMGNWQDWMQSYKELTGSIWSLVYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQDQDSDSRKDRPRFVGTKTRSRKVDILLHHMLSAELGEKDSD 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2478256 2497558 - MELO3C018734.2.1 Cme01g00330 317306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00330 743 Gene3D - 213 321 - -
Cme01g00330 743 MobiDBLite consensus disorder prediction 698 718 - -
Cme01g00330 743 ProSiteProfiles EF-hand calcium-binding domain profile. 334 369 IPR002048 GO:0005509
Cme01g00330 743 SMART efh_1 338 366 IPR002048 GO:0005509
Cme01g00330 743 SMART efh_1 379 407 IPR002048 GO:0005509
Cme01g00330 743 SUPERFAMILY EF-hand 330 421 IPR011992 -
Cme01g00330 743 Pfam Ion transport protein 139 323 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cme01g00330 743 Pfam Ion transport protein 444 687 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cme01g00330 743 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 14 740 IPR044581 GO:0005245
Cme01g00330 743 Gene3D - 433 566 IPR027359 -
Cme01g00330 743 MobiDBLite consensus disorder prediction 702 718 - -
Cme01g00330 743 CDD EFh 339 403 IPR002048 GO:0005509
Cme01g00330 743 SUPERFAMILY Voltage-gated potassium channels 441 687 - -
Cme01g00330 743 Gene3D - 567 724 - -
Cme01g00330 743 MobiDBLite consensus disorder prediction 1 29 - -
Cme01g00330 743 Gene3D - 322 405 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00330 K16900 - csv:101206980 1356.27