Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00355 ATGGGTTGGAAGAGATCTTCGAGGAATGGCAATTTGAGGATTTGGGTGCAGGTTTTAGTTGGATTCGTGGTCTGTGCAGCCCAAGTTCTTTTGGGAATTACGAATCCAGATGATTTTTCTGCTATTAGTAGCTTACATACTGCACTTGGACTCCCCAGTCTTCCTAAATGGGGCATCGGGCAAGACCCATGCGGAGATGCATGGCAGGGTGTTGTTTGTAATGATTCGAGTATCATTAGAATAATCATTAATGCTGCTAATTTGGGAGGTGAACTTGGTGACAACTTGGGATTATTTTCTTCAATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATACCATCCAATTTACCCGTTACCCTGCAGAATTTTTTTCTTTCAGCTAATCAGTTCATGGGAAGCATTCCGAGTTCATTATCATCTTTGACTCAACTGACAGCAATGTCGTTGAATGATAACAAATTAAGCGGACAAATACCAGATTCCTTTCAAGCCATTTCTCAATTGGTCAATTTGGATTTATCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGTAAGCAATTTATTGGCATTGACCTCCCTGCATTTGCAGAACAATCAGCTGTCAGGAACCCTTGATGTTCTACAAGACCTTCCACTGAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGGTGCTGAGTATCCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCGACATCTCCTCCTGTATCTCCTTCTCCACCATCACAGCCAGCACCAGCGCCGCCCGTTTCTGGAGCGCCACCAGTTTCTGGAGCACCGCCATCTTCTCAACAAAGACCTAAGAAACAGGCTGATGGACCATCAGCACCTGAGGAATCCAGTTCTGGAAAAAACAAGAAAAGCACTAAAAGGGTTGTTTTAATAACAATTGCAGTGGTTTTGTCTTTCATAATTTTGGTCTTGGCATGTGTGCTCTTTATGCCAAGGTGCAGAAGAAGAAGAAGAAGTGATAGTGTTTCGAAGCGACATCAGATAGGTGCTTATAGGGGTGAGAGAGAGAACGTCGGAAATCAGGGAGCCATGCCCCAAACAAATGATCAGATACCTAAAGTAGTTCCAAAAGAGCCAGTTGTAAGGGTGAAGCAGGAGACTCAAACAGAGGTTCAGAAGGTTCCAAAAGATCATGTGGAGAGAGAGAAAAACATGCCAAGAATGAGCGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCTCCTCCCCCTCCCCCACCACCTCCCCCTCCCCCTCCCCCTCCTGTTGAAGAGGTCACTGCCGTGCCCACTGTTCCAGCTGAAGTTCCTCCCTTGAAGCCTCTCACTAAAAATAAAATTACCTCAACTTTTGCGAAACCTTTTACCATTGCATCCCTTCAGCAATATACAAACAGCTTTTCACAAGATAATCTTCTAGGAGAAGGAATGCTGGGCAATGTTTATAGGGCACACCTCCCCAGTGGGAAGGTACTGGCCGTCAAGAAACTGGATAAGAGAGCATCCAGTCAGCAAAAGGATGATGAGTTTCTCGAGCTAGTCAATAATATTGATAGAATCCGACATGCTAATGTGGTTGAGCTCTGTGGTTACTGCGCAGAGCATGGTGAAAGGCTTCTTATCTTTGAGTATTGCAGTGGTGGAACATTGCAGGATGCACTGCACTCAGACGAAGAGTTCAGAAAGAAGCTTTCATGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCACCTGTTATTCATAGAAACTTCAAGTCTGCGAATGTCCTACTGGATGATGATCTTTCAGTGCGTGTTTCAGATTGTGGGCTGGCTCCACTAATATCAAAAGGAGCTGTTAGTCAGCTCTCTGGTCAGCTTCTAACTGCATATGGTTATGGAGCTCCAGAATTTGAATCAGGTGTTTATACACTTGAGAGTGATGTTTACAGCTTTGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTACGACAGAACAAGGACCCGAGGTGAGCAGTTTCTAGTTAGATGGGCAATTCCGCAGCTTCACGACATAGAGGCATTGACAAGCATGGTTGATCCTTCACTCAATGGTCGATACCCTGCCAAATCCTTGTCGTACTTTGCCGATATCATATCAAAATGTGTTCAGTCCGAGCCTGAATTCCGGCCACCAATGTCGTCGGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACAAGGCAGTGGTTCAAGTGAAGATTGA 2367 44.61 MGWKRSSRNGNLRIWVQVLVGFVVCAAQVLLGITNPDDFSAISSLHTALGLPSLPKWGIGQDPCGDAWQGVVCNDSSIIRIIINAANLGGELGDNLGLFSSIQTIDLSNNHIGGSIPSNLPVTLQNFFLSANQFMGSIPSSLSSLTQLTAMSLNDNKLSGQIPDSFQAISQLVNLDLSNNNLSGPLPPSVSNLLALTSLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKVLSIPNFRKDGNPFNSSVSPTSPPVSPSPPSQPAPAPPVSGAPPVSGAPPSSQQRPKKQADGPSAPEESSSGKNKKSTKRVVLITIAVVLSFIILVLACVLFMPRCRRRRRSDSVSKRHQIGAYRGERENVGNQGAMPQTNDQIPKVVPKEPVVRVKQETQTEVQKVPKDHVEREKNMPRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPVEEVTAVPTVPAEVPPLKPLTKNKITSTFAKPFTIASLQQYTNSFSQDNLLGEGMLGNVYRAHLPSGKVLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANVVELCGYCAEHGERLLIFEYCSGGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFADIISKCVQSEPEFRPPMSSVVQDLLNMIRREPQGSGSSED 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2619716 2628084 + MELO3C018757.2.1 Cme01g00355 317331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00355 788 SUPERFAMILY L domain-like 51 241 - -
Cme01g00355 788 MobiDBLite consensus disorder prediction 281 306 - -
Cme01g00355 788 Gene3D Phosphorylase Kinase; domain 1 469 575 - -
Cme01g00355 788 MobiDBLite consensus disorder prediction 247 312 - -
Cme01g00355 788 MobiDBLite consensus disorder prediction 255 280 - -
Cme01g00355 788 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 23 787 - -
Cme01g00355 788 Gene3D Ribonuclease Inhibitor 36 256 IPR032675 -
Cme01g00355 788 PANTHER OS01G0253100 PROTEIN 23 787 IPR045271 GO:0004714|GO:0006468
Cme01g00355 788 SUPERFAMILY Protein kinase-like (PK-like) 474 772 IPR011009 -
Cme01g00355 788 Gene3D Transferase(Phosphotransferase) domain 1 577 781 - -
Cme01g00355 788 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme01g00355 788 Pfam Protein tyrosine and serine/threonine kinase 501 772 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00355 Cme-Chr1:2619716 Cme03g00822 Cme-Chr3:15445884 2.11E-156 dispersed
Cme01g00355 Cme-Chr1:2619716 Cme08g00325 Cme-Chr8:2068138 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64595 PF07714 PK_Tyr_Ser-Thr 2.50E-43 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00355 - - csv:101213734 1328.54