Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00414 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCGGGAGCCGGAGCAAAAGAGTATGTTCATGTCCGCATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTTCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACATTCCTTGTGCAGGCTGGTATTGTGAAGAAGGAAAACATCAAGATTCACGGTTTCTAA 342 42.69 MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2919334 2921773 + MELO3C018807.2.1 Cme01g00414 317390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00414 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Cme01g00414 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Cme01g00414 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Cme01g00414 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Cme01g00414 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Cme01g00414 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Cme01g00414 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Cme01g00414 113 Gene3D - 1 113 - -
Cme01g00414 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00414 Cme-Chr1:2919334 Cme06g02249 Cme-Chr6:29478909 2.14E-62 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00414 K03113 - csv:101219651 228.409