Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00523 ATGGCACTTTTTTTATTGGAACGTCTCCTAGCATTTGATCCCAAATGTCGTCTAACAGCTGCAGAGGCCCTTGCTGATCCTTACTTCAACGGTATGGCGAAACAAGAACTTGAACCTTCTATTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGGAAGTTATCAAAAGATGATGTTAGAGAGTTGATTTATGCAGAGATTTTAGAGTATCATCCCCAGATGCGTCAGGGTTGTCTACGTGGTGGGGATCATCCAACTACCTTCATGTATCCAAGTGGCGTCGGTCGATTTAAGCTTCAGTTTGCACATCTGGAAGAGCACCATGGTAAAGGTGAAAGAAGAAGTCTACTTCAAAGGCAGAACATTTCTTTACCTCGGGAGCGGGTTAGTCCTATCGAGCAGAACAACACTGAGAATAACATCGATTCCGAAAGGTAG 444 42.79 MALFLLERLLAFDPKCRLTAAEALADPYFNGMAKQELEPSIQPISKLEFEFERRKLSKDDVRELIYAEILEYHPQMRQGCLRGGDHPTTFMYPSGVGRFKLQFAHLEEHHGKGERRSLLQRQNISLPRERVSPIEQNNTENNIDSER 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3899329 3900190 + MELO3C024219.2.1 Cme01g00523 317499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00523 147 MobiDBLite consensus disorder prediction 118 140 - -
Cme01g00523 147 Gene3D Phosphorylase Kinase; domain 1 53 75 - -
Cme01g00523 147 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 131 - -
Cme01g00523 147 MobiDBLite consensus disorder prediction 112 147 - -
Cme01g00523 147 Gene3D Transferase(Phosphotransferase) domain 1 2 52 - -
Cme01g00523 147 SUPERFAMILY Protein kinase-like (PK-like) 5 75 IPR011009 -
Cme01g00523 147 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 1 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00523 Cme-Chr1:3899329 Cme02g01691 Cme-Chr2:24013113 3.32E-55 dispersed
Cme01g00523 Cme-Chr1:3899329 Cme12g01839 Cme-Chr12:24749678 1.84E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00523 - - csv:101218676 281.952