Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00934 ATGCTCCGCTTTCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTCCTCCGCCGCCGCCCACAGCGGTCACTCCGATGAGGACGCCGCTCCCGAAGACGGCCCTTCCCCTTCCCCTAACCTCCGCTCCAAACCTCTCATCCTCGTCAAGATCGCCTGCCTCATTCTCATCTTCTTCGGTACCTTCATCCCCGGTATCTCCCCCTGTTTCTTCAAATGGAACGACGGCTTCCTCCTCCTCGGCACTCAGTTCGCCGGCGGCGTCTTCTTCGGCACCGCTATGATGCATTTCCTTTCCGATGCTAACGAGACCTTTCGCGATTTGACTGATAACGACTATCCCTTCGCCTTTATGCTTGCTTCTTCGGGGTTTTTGATGACCATGGCCGCGGATTGTGTGATTTCCTATCTCTATCGCAAACCAACCGCTGATTCTTCAACCGATGTTGAACTTGGAGGAGCTGCAACTTCACCCTCAAAGTTTCAGGTCCAAAATGGCAGCAATGGGCATCATCCACATCCACACCAAGCCCTCACAACAATGGGTTCATTTGGGGACAGCATTTTACTGATTGTTGCATTGTGCTTTCACTCCGTCTTTGAAGGCATCGCCATCGGAGTTGCAGAGACCGAAGCCGATGCCTGGAAAGCCCTATGGACAATCTCCCTCCACAAGGTTTTTGCAGCCATTGCCATGGGCATTGCTCTCCTCCGAATGATCCCAAACCGTCCTTTGTTGTCGAGTGCTGCCTATTCCTTTGCCTTCGCCATCTCGAGCCCCATTGGCATTGCAATTGGAATCGTAATCGATGCCACGACACAAGGTGCGGTGGCAGATTGGATATTTGCAATCTCAATGGGGCTGGCTTGTGGAGTGTTCATTTATGTGTCCATAAACCATCTGCTTTCGAAGGGATACACCCCTAGGGATTCAGTAGTTGTGGATAATCCAAATTACAAGTTTCTTGCTGTGCTTTTAGGAATTGGAGTTATAGCTATTCTAGCTAATGGGATAATTGCTGATGGCTAG 1026 51.17 MLRFLFLLLLLLLLSSAAAHSGHSDEDAAPEDGPSPSPNLRSKPLILVKIACLILIFFGTFIPGISPCFFKWNDGFLLLGTQFAGGVFFGTAMMHFLSDANETFRDLTDNDYPFAFMLASSGFLMTMAADCVISYLYRKPTADSSTDVELGGAATSPSKFQVQNGSNGHHPHPHQALTTMGSFGDSILLIVALCFHSVFEGIAIGVAETEADAWKALWTISLHKVFAAIAMGIALLRMIPNRPLLSSAAYSFAFAISSPIGIAIGIVIDATTQGAVADWIFAISMGLACGVFIYVSINHLLSKGYTPRDSVVVDNPNYKFLAVLLGIGVIAILANGIIADG 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10831566 10834799 + MELO3C024920.2.1 Cme01g00934 317910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00934 341 PANTHER ZINC TRANSPORTER 11 23 332 - -
Cme01g00934 341 Pfam ZIP Zinc transporter 47 334 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cme01g00934 341 PANTHER ZINC/IRON TRANSPORTER 23 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00934 Cme-Chr1:10831566 Cme01g01499 Cme-Chr1:19719544 1.18E-09 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00934 K14709 - csv:101208105 571.237