Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00937 ATGAGGAACTTCTTGTGTTTCCTATGTAACAATAATAAGAATAACAACAATAATGGAGGGTTTTTCCCTTCCATCATTATTGTTCTGAGTTTCCTTCTGTTGTGTGTGGTCTCTGGAGAGAGCAGCGGTAGGGGTCGTGGTGGCGGTGTGATCAGTTGGGATGATTTGCGTGTGGATGTTTGGCTGCGGCAGAGGATGAGCTCCGGCGAGGGGTTGGGAAGGAATGGGACTAGAATAATTGTGGTGGATAAAAATTGCTCCGGCGACTCCACCACGGTGCAAGGGGCGGTGGATATGGTTCCTCATAATAACAAACAGAGAGTTAAGATTTACATTCTTCCTGGCATTTACAGAGAGAAGCTATACATACCCATCACAAAGCCATATATTTCCTTGATCGGAAACAAGAATAGAGTTACAGAAACTGTTATTACATGGAACGACAAAGCATCAGACAAAAATATCAACGGAGTCGAGCTCGGGACGTATAAAACAGCAACAGTTGCAATCGATTCGGATTACTTTTGTGCCACAGGAATCACATTTGAGAATACAAATGTGGCAAAGCCAGGAGATAAAGGAAGACAAGGTGTAGCATTGAGAATAACAGGAGATAAAGCAGTGTTTTATAGAGTGAAATTCTTGGGAGGACAAGATACACTTCTCGATGATTTGGGCACACATTATTTCTATCAATGTCACATTCGAGGAAGTGTTGACTTCATTTTTGGTACTGCTAGATCACTCTATGAGCAATGTGTAATAACTTCTACAGCAGAGAGCTATGGAGCAATAGCAGCGCATCATCGAGCCTCACCAGACGATGACACCGGTTTCTCCTTCGTCCGCTGTGTAATTAATGGAAGTGGCAAAGTATACCTGGGAAGAGCGTGGGGGAACTACTCAAGAACAATATATTCTAACTGTTACATTGAAGATGTAATCAATCCATTAGGATGGAGTGACTGGAATGACCCTTCAAGACAAAGGACAGTAGTTTTTGGGCAATATAATTGCAGGGGCAGTGGAGCTAACACTAAAGATTGGGTGCCATGGGCAAAGACTTTCAGCTACGAGGAAGTGAGACCTTTTGTAGATAGAAAATACATCAAAGGAGAACAGTGGCTTAACTTATGA 1137 42.66 MRNFLCFLCNNNKNNNNNGGFFPSIIIVLSFLLLCVVSGESSGRGRGGGVISWDDLRVDVWLRQRMSSGEGLGRNGTRIIVVDKNCSGDSTTVQGAVDMVPHNNKQRVKIYILPGIYREKLYIPITKPYISLIGNKNRVTETVITWNDKASDKNINGVELGTYKTATVAIDSDYFCATGITFENTNVAKPGDKGRQGVALRITGDKAVFYRVKFLGGQDTLLDDLGTHYFYQCHIRGSVDFIFGTARSLYEQCVITSTAESYGAIAAHHRASPDDDTGFSFVRCVINGSGKVYLGRAWGNYSRTIYSNCYIEDVINPLGWSDWNDPSRQRTVVFGQYNCRGSGANTKDWVPWAKTFSYEEVRPFVDRKYIKGEQWLNL 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10852824 10856505 - MELO3C024917.2.1 Cme01g00937 317913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00937 378 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 378 - -
Cme01g00937 378 PANTHER PECTINESTERASE QRT1 29 378 - -
Cme01g00937 378 Pfam Pectinesterase 80 372 IPR000070 GO:0030599|GO:0042545
Cme01g00937 378 Gene3D - 75 378 IPR012334 -
Cme01g00937 378 ProSitePatterns Pectinesterase signature 2. 235 244 IPR033131 -
Cme01g00937 378 SUPERFAMILY Pectin lyase-like 78 377 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00937 Cme-Chr1:10852824 Cme02g00189 Cme-Chr2:1489503 6.07E-92 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00937 K01051 - csv:101209316 678.322