Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g00977 ATGCTGTTTGGGGTGATTGGTGTTTTTATATCTGCATCTATTATCACCGCTGGCAGCCAGTGGCTGTTCCCGAAAATGGGCTTTCATGGTCTGTCTGCACGGGACTATGTTGCTATAGGCGCTATTTTTTCATCCACAGACACAGTATGCACCCTGCAGGTTTTGCACCAAGAGGAAACACCTTTACTCTACAGCCTAGTCTTTGGGGAAGGAGTAGTGAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTCCAGAAGATTGATATCAGTAGGCTTAACAGCAAGACAGCCCTCCATCTTTTTGGAGATTTTTGTTACTTATTTTCAACTAGCACTGTCCTTGGAGTGACCACTGGGCTTCTAACATCATATATCCTGAAAACCTTATATTTTGGGAGACATTCAAGTGTGCGTGAGCTTGCGATAATGGTTTTAATGGCTTACCTATCGTACATGCTAGCAGAGTTACTGGAGTTGAGTGGAATACTCACAGTTTTCTTTTGTGGGATTATCATGTCGCACTATGCATGGCATAATGTGACTGATAGTTCAAGAATTACCACCAGGCATGTATTTGCAATGATGTCGTTTGTTGCTGAAACTGCAATATTTCTTTATGTGGGCATGGATGCTCTTGACATTGAGAAGTGGAAGATAACTAAATTAAGCTTGTGGAAGTTGCTTGGCACATACACCATCATAGTTTTTTTGGTATTGGTTGGTCGTGCGGCCTTTGTATTTCCTCTATCTGCCATATCTAATTACTTCATTAAACGTGAAGATAGATCGTCATCGCCTTCTATGATCTCATTTAAACAACAGATCATTATATGGTGGGCTGGATTGATGAGAGGAGCTGTCTCCATTGCTCTGGCTTTCAAACAGTTCACATATTCCGGGGTTACAGTGGATCCAATCCATGCAACAATGATTACCAACACCACAATTGTTGTACTCTTCACGACAGTGGTATTTGGATTTCTAACGAAGCCACTCATAAGTTGTCTACTTCCTCCCAACCAAGCAAGTAGCAGTGTAAGCAACTCCAGACCAAAGTTCACTGAAGAGGACATAACTCTCCCTTTGCTTTCCATGGAAGAGTCTGCTGCGACCAATGTCCTCCGCGCAAAGGATAGTTTGTCGATGTTAATAGAGAGGCCTGTTTATACCATACATTACTTTTGGAGGAAATTTGATGATTCCTACATGAGACCTATATTTGGGGGACCTCGCCACAACCAACCACCGGGTGGATCTGGTTGTTAA 1269 42.47 MLFGVIGVFISASIITAGSQWLFPKMGFHGLSARDYVAIGAIFSSTDTVCTLQVLHQEETPLLYSLVFGEGVVNDATSVVLFNAVQKIDISRLNSKTALHLFGDFCYLFSTSTVLGVTTGLLTSYILKTLYFGRHSSVRELAIMVLMAYLSYMLAELLELSGILTVFFCGIIMSHYAWHNVTDSSRITTRHVFAMMSFVAETAIFLYVGMDALDIEKWKITKLSLWKLLGTYTIIVFLVLVGRAAFVFPLSAISNYFIKREDRSSSPSMISFKQQIIIWWAGLMRGAVSIALAFKQFTYSGVTVDPIHATMITNTTIVVLFTTVVFGFLTKPLISCLLPPNQASSSVSNSRPKFTEEDITLPLLSMEESAATNVLRAKDSLSMLIERPVYTIHYFWRKFDDSYMRPIFGGPRHNQPPGGSGC 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11494596 11500364 + MELO3C013102.2.1 Cme01g00977 317953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g00977 422 Gene3D - 32 84 - -
Cme01g00977 422 PANTHER SODIUM/HYDROGEN EXCHANGER 1 414 IPR018422 GO:0006812|GO:0015299|GO:0016021
Cme01g00977 422 Pfam Sodium/hydrogen exchanger family 2 334 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cme01g00977 422 PANTHER SODIUM/HYDROGEN EXCHANGER 1 414 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00977 Cme-Chr1:11494596 Cme11g01975 Cme-Chr11:27727998 8.99E-164 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g00977 - - csv:101217775 786.949