Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01033 ATGGATGGTGAAGGTTCTAGGGTTTTAACGGTAATTGTTCCTATGCTTTCAGATTCTTGGTTGTTCGGTTTCGTGCAAGTTTCCATCCAAACAAGGTTCATGGTTGAATTAGATTTCCAGATCCCATCTGCGTTTGATCCATTTGCCGACGCCAAAGATTCGGATGCCCCCGGAACGAAAGAGTATGTTCATATTCGCGTCCAGCAAAGGAACGGCAAGAAGTGCTTGACAACAGTTCAAGGTCTGAAAAAAGAGTTCAGTTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAGGGTGATCAACGCAAGAACGTCTCTCAGTTTCTTGTTCAGGCTGGTCTTGTCAAGAAAGATCAGATCAAGATCCATGGATTTTAA 438 42.47 MDGEGSRVLTVIVPMLSDSWLFGFVQVSIQTRFMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12741259 12742555 + MELO3C013163.2.1 Cme01g01033 318009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01033 145 ProSiteProfiles Translation initiation factor SUI1 family profile. 63 133 IPR001950 GO:0003743|GO:0006413
Cme01g01033 145 SUPERFAMILY eIF1-like 31 145 IPR036877 GO:0003743|GO:0006413
Cme01g01033 145 Pfam Translation initiation factor SUI1 60 133 IPR001950 GO:0003743|GO:0006413
Cme01g01033 145 Gene3D - 27 145 - -
Cme01g01033 145 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 40 145 IPR005874 GO:0003743
Cme01g01033 145 CDD eIF1_SUI1 61 144 IPR005874 GO:0003743
Cme01g01033 145 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 34 145 - -
Cme01g01033 145 PANTHER BNAA10G09260D PROTEIN 34 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01033 Cme-Chr1:12741259 Cme06g02249 Cme-Chr6:29478909 7.99E-76 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01033 K03113 - csv:101202908 228.794