Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01045 ATGGAGGGTACAATTATTAGAAGGGTGATTCCGTCAGACAACAGTTGTCTCTTCAATGCTGTTGGGTATGTTATGGACCATGATAAACACAAGGCTACTGAGCTAAGACAGGTTATAGCTGCAACCGTAGCTAGTGATCCGACAAGGTATTCTGAAGCATTTCTTGGAAAACCAAATGAGGAGTACTGTTCTTGGATTCTTGATTCAGAGAAGTGGGGAGGTGCAATTGAGCTTTCTATACTATCTGAGTATTATGGACGTGAAATAGCAGCATATGATATCCAGACAGCACGATGTGATTTGTACGGTCAGGAAAAGAGGTATTCAGAAAGGGTTCTGCTGATATACGACGGACTCCACTATGATGCTTTAGTTATGTCTCCAGCTGAGGATGCTCCAGAGGAATTTGATCAGACCATATTTTCTGTGAATAGAGACAGGACGATTGGGCCGATTGAGGAGCAAGCTCTTCATTTTGTTAAAGATCAACAAAGGAAAAGGAGATTCACCGACACCGCCAACTTTACACTGCGCTGTGGGGTTTGCCAAATTGGAGTTGTTGGCCAAGCGGTATTTCTTGTCAAAGTTCATTAA 594 42.76 MEGTIIRRVIPSDNSCLFNAVGYVMDHDKHKATELRQVIAATVASDPTRYSEAFLGKPNEEYCSWILDSEKWGGAIELSILSEYYGREIAAYDIQTARCDLYGQEKRYSERVLLIYDGLHYDALVMSPAEDAPEEFDQTIFSVNRDRTIGPIEEQALHFVKDQQRKRRFTDTANFTLRCGVCQIGVVGQAVFLVKVH 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12893404 12900484 + MELO3C013167.2.1 Cme01g01045 318021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01045 197 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Cme01g01045 197 Gene3D - 1 173 - -
Cme01g01045 197 Pfam OTU-like cysteine protease 12 102 IPR003323 -
Cme01g01045 197 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 190 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Cme01g01045 197 PANTHER UBIQUITIN THIOESTERASE OTU1 6 190 - -
Cme01g01045 197 SUPERFAMILY Cysteine proteinases 6 125 IPR038765 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01045 K13719 - csv:101222942 382.489