Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01129 ATGAGAGATTTTAAGGGAAGTCCTGATGATTTTGCCACTGGAGGAACTGGTGGTGTTGCTGGGGTATCTTGGCCTGTGTTTAGGTGGGGTGGTGGAAAGGATGATAAATACTTTGCTAGAATTGGGAAGAATGTGATTTCAGTCTATGAAACAGAGACTTTCTCCCTTATTGACAAAAAGTCTTTGAAGGTTGAAAATGTTATGGATTTCTGCTGGTCACCTACAGATCCCATTATTGCCCTGTTTGTTCCTGAGCTAGGTGGTGGGAACCAACCAGCTAGGGTGAGTCTTGTCCAGATCCCCAACAAGGAGGAGTTGAGACAAAAAAATCTTTTTAGCGTTAGCGATTGCAAAATGTACTGGCAAAGCAATGGTGATTATCTTGCTGTCAAGGTTGACAGATATACAAAGACAAAGAAAAGCACATATACAGGGTTTGAGCTTTTACGCATAAAAGAGCGGGATATTCCCATCGAAGTGTTGGAGCTTGAGAATAAGAATGACAAGATCATTGCATTTGCATGGGAGCCAAAGGGGCACAGGTTTGCAGTTATTCATGGCGATAACCCAAGGCCGGATATTAGCTTTTACTCCATGCGAAGCACACACAGCAGTGGCCGAGTGTCAAAACTTACAACTCTCAAAGGCAAGCAGGCCAATGCTCTTTTCTGGTCACCTGCTGGACGTTTTATTATTCTTGCTGGCTTGAAAGGTTTTAATGGACAGTTGGAATTCTACAATGTTGATGAGCTGGAGACGATGGCAACTGCGGAACATTTCATGGCTACTGATATTGAATGGGATCCTACTGGAAGGTATGTCGCTACTGCTGTAACTTCGGTTCATGAGATGGAAAATGGTTTCAACATTTGGTCCTTCAATGGAAAACTCCTCTATCGAATCTTGAAGGACCATTTCTTTCAGTTTGCATGGCGCCCGAGGCCACCATCTTTCTTGAGTCCCGAGCAAGAGGAAGAGATAGCAAAGAATTTGAAGAAGTACACTAAGAAGTACGAAGCTGAAGATCAGGATGTATCTATGCTACTGAGTGAGCAAGACCGCGAGAAACGGAGAATGTTGAAAGACCAGTGGGACAAGTGGTTGAATGAATGGAAGAGATTGCATGAAGAAGAGAAGTTGTTGCGGCAGAAGCTGCGGGATGGTGAAGCCAGTGATGAAGAAGAGGAATACGAAGCCAAAGAGGTTGAAGTCGAAGAGATTCTGGATGTATCGGAGGAAGTTTTGTCCTTTGATTTTGAGCAGTAA 1266 43.76 MRDFKGSPDDFATGGTGGVAGVSWPVFRWGGGKDDKYFARIGKNVISVYETETFSLIDKKSLKVENVMDFCWSPTDPIIALFVPELGGGNQPARVSLVQIPNKEELRQKNLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSTYTGFELLRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPRPDISFYSMRSTHSSGRVSKLTTLKGKQANALFWSPAGRFIILAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRILKDHFFQFAWRPRPPSFLSPEQEEEIAKNLKKYTKKYEAEDQDVSMLLSEQDREKRRMLKDQWDKWLNEWKRLHEEEKLLRQKLRDGEASDEEEEYEAKEVEVEEILDVSEEVLSFDFEQ 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14464163 14469391 + MELO3C023701.2.1 Cme01g01129 318105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01129 421 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 1 415 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Cme01g01129 421 SUPERFAMILY DPP6 N-terminal domain-like 32 316 - -
Cme01g01129 421 Coils Coil 390 410 - -
Cme01g01129 421 Gene3D - 43 326 IPR015943 GO:0005515
Cme01g01129 421 Pfam Eukaryotic translation initiation factor eIF2A 109 309 IPR013979 -
Cme01g01129 421 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 8 416 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Cme01g01129 421 PANTHER BNACNNG51870D PROTEIN 1 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01129 Cme-Chr1:14464163 Cme07g01936 Cme-Chr7:24553025 1.84E-25 dispersed
Cme01g01128 Cme-Chr1:14464159 Cme01g01129 Cme-Chr1:14464163 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01129 K03253 - csv:101216475 820.461