Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme01g01185 | ATGGCTCTCAGTGGTAAAGGTTCAGATCTTTTGAATCTTGGAGTGGTGGATGTTGAATATAAGAGGGTGCCATGTGAATATCCAAATTATAGGAATTTGTTGGTGAGAGTGGAAGAATCAAGCTACAACCCATTCAAATTGGCAATAAAATTTTTGTACCAAGGTGGGCAAACAGAGATGGTTGCTGTCGATATAGCTCAGGTTGGGACATCAGATTGGAGCCATATGAAGAGAAGTTACGGAGCTGTTTGGGAAACAGACAATGTACCTGAAGGTGCATTGCAGTTGAGGATGGTTGTGACTTCTGGATATGATGGAAAATGGGTTTGGGCAAAGTCTGTACTTCCTGCTAACTGGAGAGCTGGGGCGATTTACGATACTGGAGTTCAAATCAAGGACATTGCTAAAGAGAGTTGTCCTCCATGGCAATGTGGTGACAATCCATGGAAATGA | 453 | 42.83 | MALSGKGSDLLNLGVVDVEYKRVPCEYPNYRNLLVRVEESSYNPFKLAIKFLYQGGQTEMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGYDGKWVWAKSVLPANWRAGAIYDTGVQIKDIAKESCPPWQCGDNPWK | 150 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 15057948 | 15059532 | - | MELO3C013293.2.1 | Cme01g01185 | 318161 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme01g01185 | 150 | SUPERFAMILY | PHL pollen allergen | 31 | 126 | IPR036749 | - | |
Cme01g01185 | 150 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 45 | 127 | IPR007117 | - | |
Cme01g01185 | 150 | PANTHER | EXPANSIN-B3 | 1 | 146 | - | - | |
Cme01g01185 | 150 | PANTHER | EXPANSIN-LIKE A1-RELATED | 1 | 146 | - | - | |
Cme01g01185 | 150 | PRINTS | Expansin/Lol pI family signature | 73 | 87 | IPR007118 | GO:0005576 | |
Cme01g01185 | 150 | PRINTS | Expansin/Lol pI family signature | 13 | 29 | IPR007118 | GO:0005576 | |
Cme01g01185 | 150 | PRINTS | Expansin/Lol pI family signature | 113 | 127 | IPR007118 | GO:0005576 | |
Cme01g01185 | 150 | Pfam | Expansin C-terminal domain | 35 | 116 | IPR007117 | - | |
Cme01g01185 | 150 | Gene3D | - | 27 | 132 | IPR036749 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g01185 | Cme-Chr1:15057948 | Cme01g01187 | Cme-Chr1:15072172 | 3.56E-76 | dispersed | |
Cme01g01184 | Cme-Chr1:15047964 | Cme01g01185 | Cme-Chr1:15057948 | 1.30E-62 | tandem | |
Cme01g01185 | Cme-Chr1:15057948 | Cme01g01186 | Cme-Chr1:15062711 | 1.52E-67 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme01g01185 | - | - | csv:101209628 | 303.908 |