Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01220 ATGGCGAATCTCTCCACTCTGGTTCACGAGCTTCGAGAACGTATAGCAGCTTCCTCATCCACTCCTAATCGTGCCGATGACTTCGGTCTCGAAGTCCGATTTCGCGCATTCCTTCCCAATCTTCTTCACGATCACGTCGTTCCATCTTCCTCAGTAAATGAGAGAGAAGTAGTTGCTGTGTTGAAGCTCATCTCGATCACTGCCAGGAACTTTCCTGGCGTCTTTTACCATGGAAAGGCTAGCGCCGTTTTGCCTGTGATTGCCCGGATACTGCCTTTTTTTGCGGAGACCACTATCCAGGCACAACATGGAGTCATTTTTGAAACCGTTGGTTCCCTTTTATCCTTGCTTCGTACTGGAGCACGGGATGCATACCGTCAGTTTTTTCTCGATGCCATGTCAGTTGTTGAAGATATTTTATACACTGCATCACTTGGCACTGATACTTCAAGCTTTGTGGAGTCCACAAGTATCAATTTGAATTGTTTCTGTGAATCTTTAAAGGGAATCTTTGAGGATCCCGATCATCTTGTGGATCTTCCAGAAGTCAACAGACCAACTAATGGCTCTGGTATTTTGATAAATCTAACGGGGAAAAAGAGGTGGCGGCCTTTTGCGACTTGGATTATTAAGCTTCTTGGTAGATGCTTGGCTGAGGGAACTGTGTACGTTGAAGGACTTATCAGTATGTCAGATGTTTCAGCAGCATGTTCATTATTATGTTATGGGGATGCTGATCTGCAAATGGCATGTTTTGACTTTGCACGTATTGTTGGATTGGTGATAGATGACATCGTTCCTTATCAGCCTTTAATCCAGTCAATATCTACTATATTAAGTGAAGACAAACAGGGGCTTCCTGTATTTAGGAACATACCATATGATACTTCTATTGGAGGTTGTCTTAATGTTCTATACTCCAATTGTTGCGACGATGTTGTCAAGCTAACTGCTGCAGACATGGTTGGCATATTTTCACAGTCCTTGTGGAGAACCAAGAGCATGGAGCTCAAGGTTTCCTTATGCAATGCATACATGCGGATTGCTAAAATATGTCCTTCTCATATCTGGAGGCCTGAAATACTCGTTGATATGCTTTCTTTTCCAGAACCTTGCTTTGCTTTGATAGATTGCTTCAAAGCAGTTCTATCTATTCTTGGTCCTGATTATGTTGGAGGGTCTTTACCAGGCATGGGTTCGTCAGAATTGAGCAATAAATCAATCGAAACCTCTAGAATTGGAGAAAAGAGACCCTTTGAGGATCTGGATATTGTGAAGAAAAAAAGACCAAAGATGGATGGAGAAATTGTGAGCTCCGAAGCTGATATTATGGTTGAATGCAAGAAGCCTCACGTTAAAATTTGTGAAACTGAAGAAACTTATGCAAATAATTTGCATAATTTACTTGTTTCATTTGTTGGATGTTTAAAAGCTTCTTCCATCAGGGCTGATGCTCTAAGACCAGAAGTCTCACTAACAGCTCTTAGCATGCTGTGTATTGCTTTCTGTCGGTACCCTGAAACTCGTTTGTCCATGGTCATATTTCAGGAGATGATTTCATGGATTCCCTGGATATATGAGCAGGCGAAGAAAGGAAGCTCAATTTCCATTGACATCTCCATTTTTCTTGAAGGAATCCACAACATACTTCTCTTACCAAACCATATATCTTCATGTTTATTTTCACTCTTGTCTGGAAGTAATGGTGAATGTGCTGAAACGATGTCTGTGATACTTAAAGTTCCATGGACCCATTCAATCACCAGTACTGAATCTCACAAGCCATGGAAGACAAGATGCATCTCTGTTCAGGTTTCGTCAAAAATTACTTCTATCACGAAGGATGAAACTGATCTTGAGGTCCTAGATTTGAGTCTTGTTGATGAAGATGATGAAGTTAGAACTGAGGCTGCCATTTCAATTCCAGTGATTGCTCTATGGACTGGTTTTGACAGGCTAACACCGTTATTTAGGAGACTGGAGATCTTGAAGGAAGAAATGCATGAAAAAGTTAAGAAGATTATCCCAGTTTCTCTTGGGTTTTTATCATGCCTGTATGGATCTTGCCATTCAGTGAGTAGGTGCAAATTATTTTTAAATACCAACAGTGATAGATGTTGCCAGACAGTTGACTATGTGCTACAAGGATTTTGGTGTTCAAAGTGTGATCAGACTGTTGTGCATGATCATGAACTTTATACAAATATAATTGAGCAATCAGACTGTTACCCAAAAATGAATTTGGATAGTGATTTTGTCCATTTAGTGTCGATGTTTTTCAAACTTCTTTTTGATGAGTCTTCAGAAGAGGTTCAATTGTCCTGTGTGGGAACTCTTAGACGAATTCTGGTCCATGGGAGAAGGGGTGTTCTACATCAAATGAAGACCAATTGGCTTAAATGTGTCGAGTTTTTGCTTCTGAACAGAAAAAAGTCAATTAGAGAAGCATTCTGCCTTCAAATTAGTTCCTTCCTAGAGGATCACATCACGAGTTGCTTTTTCTCGGAAGAAGATATTTCAAACAAAAGGAAAGAGGTAATGTTTTTGGATTTTATTAAAAATGCAATGGTATCAACTGCAGATCCCCAAATTCTGGACACTATACTAGAATCTGTAGCAGAGCTCATGAATGCAGTTGATATTCACAGTGACTTTTTCTCCCTTTCTCTTTTATTGTTGGTTGATCATCTTGATAATCCACACATTACAGTGAGGTTGAGTGCTTCAAGGGCTATCCACAGAGCTTGTTGTTTCCATTTTAATGGGAATTTTGATATGATATTTTCAAAAGTTATCCATCTACGTAATGAGCTATTTGATCACGTCTCTAGCAGACTTGTTAACCATCCAAAAATTGTACAAGAATTTGCAGAAGCTGTTTTGGGTGTTGAAACTGAAGTATTTGTTAAGAAAATGATTCCTGTTGTTCTTCCAAAGCTGATTGTCTCTCATCAGAACAACGATCAAGCTGTTGAATCTTTATATGAATTAGCTAAGTGTGTGGACACAGATATGGTTACGTTAATAGTAAATTGGTTGCCGAAAGTTCTTGCCTTTGTTCTCTACCAAGCAAATGGGAAGGAGTTATGTTCTGCCTTGGAATTTTATCATGCTCAGACGGGTTCAACTCAGGAAGAAATTTTTGCTGCTGCATTACCTGCACTTCTTGATGAACTAGTATGCTTTGTGGATGGTGGCAATTCAGATGAGGTCAGTAAAAGGTTAGCAAGAGTTCCCGAGATGATATTACAAGTTGCTAGAGTTCTTACTGGAGGGGATGATCTTCCAGGATTTTTGAGGAATCATTTTGTTGGCCTCCTTAACAGCTTGGATAGGAAAATGCTGCATGCAGAGGATGTTTGCCTGCAGAAACAAGCCCTGCAACGAATTGAAATGCTGATAAAATTGATGGGTTCTCATCTTAGTACTTATGTGCCAAAACTAATGGTTCTTCTTATGCATGCTATTGGGAAAGAAGAACTGCAAAGTGAAGGTCTCATTGTTTTGAATTCTTTTATCCAACAATTGGCTATGGTATCACCATCTAGCATCAAGTATGTGATTTCTCAAGTCTTTGCTGCACTTGTGCCTTTCCTGGAGAGAGATGAAACTTCCACACATTTAGATATGGTGGTAAAAATTTTGGAAGAGCTTGTTTTGAAAAACAAGAGTATACTAAAGGTGCACATACGTGAATTCCCTCCACTGCCTTGTATTTCAGCTCTGACAGAGGTGAACAGAGCTATAAATGAAACTCGTGGATCAATGACTCTAAAGGATCAACTACGAAATGTTGTAGATGGCTTAAATCATGAGAACTTAAAAGTGAGATACATGGTGGCATGTGAATTGAGAAAATTGTTGAACATGAGAAGCAAGGAGGTTACAACTCTGATAAGTGCTGAAGCTGACCTAGACATGGATGTTCTGAGCTTACTAATCTCATCCTTGCTAAGAGGGTGCGCTGAGGAGTCAAGGACTGCAGTGGGCCAACGGCTGAAATTGATTTGCGCTGATTGTATTGGAGCACTAGGTGCTGTTGATCCTGCTAAAGTGAAGAGCTTTTCTTGCGAACGATTTAAAATTGAATGTTCTGACGATGATCTAATTTTTGAGTTGATTCACAAACACTTAGCTCGGGCTTTTGGAGCTGCACCAGATACCATTATTCAAGATTCAGCGGCATTAGCCATTCAAGAGCTTCTAAAAATTGCAGGGTGTAAGGCATCGTTGGATGACAATACTGCTCCTTCAGCTTCACCATCGTTGAAAGATAAAGAAACTTCAAAAACTGTGACATCTGATTCTTCTGATGATGGTCATGCTATGAGTATAAGAGGTCAGAGATTGTGGGGACGTTTCTCTGATTATGTGAAAGAAATTATAGCACCATGCTTAACCTCAAGATTTCAACTCCCAAATGTGGTTGACTCTGCATTTGCTAGTTCAATTTATCGACCAGGCATGTCATTCAGAAGGTGGATATATTTTTGGATAAAAAAACTAACTGCACATGCAACTGGGTCTCGTGCAGGTATCTTTCATGCTTGTCGTGGTATAGTGCGGCATGATATGCAGACGGCTGTTTATTTGCTGCCTTATTTAGTTCTTAGTGCTGTCTGTCATGGTACAGAGGAAGCACGACATGGCATAACAGAAGAAATCTTGTCTGTTCTCAATGCTGCAGCTGCAGAGAATGGTGTGGCTTTGATTCACGGAAATACTGGGGGGCAAAGTGATGTTTGCATTCAAGCTGTATTTACTCTTCTTGATAATCTAGGACAGTGGGTGGATGATGTTGAACGAGGATTGTCACTTTCGCAATCTGGTCAGTCATCGTCTTCTAAGCATTTGGTGGCCAAATCAAGGGAATCAAGTTCAATTGTTCATGTTGATCAGGAGCAACTCCTGGTTCAGTGTAGATATGTTTCACAGCTTTTAGATGCAATTCCAAAGACTACTCTTGCTAGGGCTTCCTTGAGCTGTCAGGCCTATGCTAGATCTTTGATGTATTTTGAGTCGTATGTACGAGGAAAATCTGGTTCTTTTAACCCCGCGGCTGAGAGGAGTGGCATCTTTGAGGATGAAGATATTTCATATCTCATGGAAATATATAGTTGTCTTGATGAGCCTGATGGTCTATCTGGCTTGGCATGTTTACGTAAATCCTTGAGGTTACAAGACCAACTTTTGATAAATAAAAAAGCTGGAAATTGGGCAGAAGTTTTGACTTTTTGTGAACAGGCCTTGCATATGGAACCAGATTCAGTTCAAAGGCATTCGGATGTTCTTAATTGTTTGTTAAATATGTGCCATCTCCAAGCTATGGTTACTCATGTGGATGGTTTAATCACGAGGATTCCTCAGTACAAGAAAACGTGGTGCATGCAAGGAGTGCAGGCAGCTTGGAGGCTTGGCAGGTGGGACCTGATGGACGAATACCTCAAGGGAGCTGATGAGGAAGGTCTTCTTTGTAGCAGCTCTGAGAGTAATGCTTCTTTTGACATGGACGTAGCAAAAATTCTGCAGGCAATGATGAAGAAGAATCAGTTTTCAGTTTCTGAGAAAATTGCTCTATCCAAACAGTCTCTGATTGCCCCTCTTGCTGCTGCTGGCATGGATTCTTACGCACGTGCTTATCCATTTGTTGTGAAACTCCACCTTCTGAAAGAGCTTGAGGACTTCCATAACCTTCTCTTTAATGACTCTTTCTTGGAAAAATCATTTCATGTAGATGATCAAGAATTTTCAGAAATGATACAAAATTGGGAGAACCGGCTGAAATTTACTCAGTCATCACTCTGGGCAAGAGAGCCACTCCTGTCATTTCGGAGATTGGTTTTTGGTGCTAGTAGTCTTGGTGCTCAAGTTGGGAACTGCTGGCTTCAGTATGCAAAGCTCTGTCGCTCTGCTGGTCATTATGAAACAGCAAAGCGTGCAATTCTTGAAGCTCAGGCCTCTCGTGCACCTAATGTCCATATGGAGAAAGCAAAACTTCTATGGAGTACTAGGCGGTCTGACGGTGCTATCTCAGAATTGCAACAATCTCTTCTAAATATGCCTGTGGAAGTTATAGGATCTGCTGCAATGTCATCAATAACAAGCCTTTCCTTGGTTCCAATGAATCCAGCTCCTTTAATCTGTGATACTCAAACTTTGAATGAGAATAGAGATATTGCAAAGACTCTTCTCCTATACTCAAGGTGGATACATTGCACTGGGCAAAAGCAAAAGGAAGATGTCATCAATCTTTATTCAAGAGTGAAGGAGTTACAGCCCAAGTGGGAGAAAGGATATTTTTTTATGGCCAGGTACTGTGATGAATTGCTTGAAGATGCCAGGAAGCGCCAGGAAGATAGTTTAGAACAAGGTCCGAGAAAAGTCTCATCATCTTCTACCGCTATTGGCCCTTCAAATTTAAATAATGAGAAGCCCTGGTGGTCTTATGTGCCTGATGTACTCCTGTTCTATGCGAAAGGACTTCACAGGGGTCACAAGAATCTATTTCAAGCACTTCCAAGGTTGTTAACTTTGTGGTTTGACTTTGGAAGCATCTACCAAAGAGTTGGTTCATCATCCAACAAAGAGTTGAAAAGTGTTCATGGAAAGGTTCTGAGCATCATGCGGGGTTGTTTAAAGGATTTGCCAGCATATCAATGGTTGGCTGTACTGCCTCAGTTAGTTTCAAGGATTTGTCATCAGAATGAAGAAACTGTTCGATTGGTCAAATACATAATTGCTTCTGTTGTCCGACAGTATCCACAGCAAGCGCTTTGGATAATGGCTGCAGTTTCAAAATCCACTGTTCCTTCAAGACGAGAGGCAGCTATGGAGATAATCCATTCTGCAAAAAAAGATTTCAGTCAAGGAAACGGTGGCAACAATTTATTTCTTCAGTTTGCCAGTCTAATCGATCATTTAATTAAGTTGTGCTTCCATCCAGGTCAACAAAGAGCGAGGAACATTAATATTTCTATGGAATTTAGCACATTGAAGAGAATGATGCCATTGGAGATTATTATGCCAATTCAACAATCTCTGGTTGTTAATCTGCCGACATATGATGCGAATCTCACTGATTCACCAAGTTCTGACATCTTTTCTGGCACAGAGCTTCCTACAATATCAGGAATAGCTGATGAGGCTGAGATTCTTTCATCACTTCAGCGGCCCAAGAAAATTATTCTATTGGGTAGTGATGGTATTGAGAGACCATTCCTCTGCAAACCCAAGGATGATCTCCGGAAGGATGCTCGCATGATGGAGTTCACAGCAATGATTAACCGTTTATTATCCAAATATTCAGAAAGCCGCCGAAGGAAGCTCTACATACGCACTTTTGCTGTGATACCTCTGACAGAGGATTGTGGTATGGTAGAATGGGTTCCCCATACTCGTGGTCTAAGACATATACTGCAAGACATATATATTACTTGCGGTAAGTTTGACAGGCAGAAGACAAATCCCCAAGTTAAGCGAATATATGATCAGTGCCAAGGTAAAATACCTGAAAGTGAGATGCTGAAGACAAAAATTCTTCCTCTGTTCCCTCCCGTTTTCCATAGATGGTTTTTGAATACCTTTTCAGAACCAGCCGCTTGGTTTAGAGCCCGTATAGCTTATGCACATACAACTGCAGTTTGGTCTATGGTTGGGCATATTGTGGGGTTAGGTGATAGACATGGTGAAAATATTCTTTTTGATTCTACTACGGGTGACTGCGTTCATGTCGATTTCAGTTGTTTATTTGACAAAGGTCTGCAGCTTGAGAAGCCTGAACTGGTGCCTTTTAGGCTAACCCAGAACATGATCGATGGACTAGGAATCACCGGTTATGAGGGCATTTTCTTGAGAGTTTGTGAAATTACACTTTCTGTATTAAGATCTCATCGGGACACTCTGATGAGCATACTCGAAACTTTCATTCATGATCCGCTTGTGGAGTGGACAAAATCTCACAAATCCAGTGGTGTTGAAGTTCAGAATCCACATGCTCAGTTAGCCATCAGTAACATTGAGGCTAGGTTACGAGGTGTAGTTGTTGGCGTTGGAGCTGCACCATCTTTGCCCCTGGCTGTCGAAGGTCAGGCTCGTCGGTTAATTGCTGAAGCAGTTGCACACAAAAATCTTGGGAAGATGTACATATGGTGGATGCCATGGTTCTAG 8166 40.95 MANLSTLVHELRERIAASSSTPNRADDFGLEVRFRAFLPNLLHDHVVPSSSVNEREVVAVLKLISITARNFPGVFYHGKASAVLPVIARILPFFAETTIQAQHGVIFETVGSLLSLLRTGARDAYRQFFLDAMSVVEDILYTASLGTDTSSFVESTSINLNCFCESLKGIFEDPDHLVDLPEVNRPTNGSGILINLTGKKRWRPFATWIIKLLGRCLAEGTVYVEGLISMSDVSAACSLLCYGDADLQMACFDFARIVGLVIDDIVPYQPLIQSISTILSEDKQGLPVFRNIPYDTSIGGCLNVLYSNCCDDVVKLTAADMVGIFSQSLWRTKSMELKVSLCNAYMRIAKICPSHIWRPEILVDMLSFPEPCFALIDCFKAVLSILGPDYVGGSLPGMGSSELSNKSIETSRIGEKRPFEDLDIVKKKRPKMDGEIVSSEADIMVECKKPHVKICETEETYANNLHNLLVSFVGCLKASSIRADALRPEVSLTALSMLCIAFCRYPETRLSMVIFQEMISWIPWIYEQAKKGSSISIDISIFLEGIHNILLLPNHISSCLFSLLSGSNGECAETMSVILKVPWTHSITSTESHKPWKTRCISVQVSSKITSITKDETDLEVLDLSLVDEDDEVRTEAAISIPVIALWTGFDRLTPLFRRLEILKEEMHEKVKKIIPVSLGFLSCLYGSCHSVSRCKLFLNTNSDRCCQTVDYVLQGFWCSKCDQTVVHDHELYTNIIEQSDCYPKMNLDSDFVHLVSMFFKLLFDESSEEVQLSCVGTLRRILVHGRRGVLHQMKTNWLKCVEFLLLNRKKSIREAFCLQISSFLEDHITSCFFSEEDISNKRKEVMFLDFIKNAMVSTADPQILDTILESVAELMNAVDIHSDFFSLSLLLLVDHLDNPHITVRLSASRAIHRACCFHFNGNFDMIFSKVIHLRNELFDHVSSRLVNHPKIVQEFAEAVLGVETEVFVKKMIPVVLPKLIVSHQNNDQAVESLYELAKCVDTDMVTLIVNWLPKVLAFVLYQANGKELCSALEFYHAQTGSTQEEIFAAALPALLDELVCFVDGGNSDEVSKRLARVPEMILQVARVLTGGDDLPGFLRNHFVGLLNSLDRKMLHAEDVCLQKQALQRIEMLIKLMGSHLSTYVPKLMVLLMHAIGKEELQSEGLIVLNSFIQQLAMVSPSSIKYVISQVFAALVPFLERDETSTHLDMVVKILEELVLKNKSILKVHIREFPPLPCISALTEVNRAINETRGSMTLKDQLRNVVDGLNHENLKVRYMVACELRKLLNMRSKEVTTLISAEADLDMDVLSLLISSLLRGCAEESRTAVGQRLKLICADCIGALGAVDPAKVKSFSCERFKIECSDDDLIFELIHKHLARAFGAAPDTIIQDSAALAIQELLKIAGCKASLDDNTAPSASPSLKDKETSKTVTSDSSDDGHAMSIRGQRLWGRFSDYVKEIIAPCLTSRFQLPNVVDSAFASSIYRPGMSFRRWIYFWIKKLTAHATGSRAGIFHACRGIVRHDMQTAVYLLPYLVLSAVCHGTEEARHGITEEILSVLNAAAAENGVALIHGNTGGQSDVCIQAVFTLLDNLGQWVDDVERGLSLSQSGQSSSSKHLVAKSRESSSIVHVDQEQLLVQCRYVSQLLDAIPKTTLARASLSCQAYARSLMYFESYVRGKSGSFNPAAERSGIFEDEDISYLMEIYSCLDEPDGLSGLACLRKSLRLQDQLLINKKAGNWAEVLTFCEQALHMEPDSVQRHSDVLNCLLNMCHLQAMVTHVDGLITRIPQYKKTWCMQGVQAAWRLGRWDLMDEYLKGADEEGLLCSSSESNASFDMDVAKILQAMMKKNQFSVSEKIALSKQSLIAPLAAAGMDSYARAYPFVVKLHLLKELEDFHNLLFNDSFLEKSFHVDDQEFSEMIQNWENRLKFTQSSLWAREPLLSFRRLVFGASSLGAQVGNCWLQYAKLCRSAGHYETAKRAILEAQASRAPNVHMEKAKLLWSTRRSDGAISELQQSLLNMPVEVIGSAAMSSITSLSLVPMNPAPLICDTQTLNENRDIAKTLLLYSRWIHCTGQKQKEDVINLYSRVKELQPKWEKGYFFMARYCDELLEDARKRQEDSLEQGPRKVSSSSTAIGPSNLNNEKPWWSYVPDVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGSIYQRVGSSSNKELKSVHGKVLSIMRGCLKDLPAYQWLAVLPQLVSRICHQNEETVRLVKYIIASVVRQYPQQALWIMAAVSKSTVPSRREAAMEIIHSAKKDFSQGNGGNNLFLQFASLIDHLIKLCFHPGQQRARNINISMEFSTLKRMMPLEIIMPIQQSLVVNLPTYDANLTDSPSSDIFSGTELPTISGIADEAEILSSLQRPKKIILLGSDGIERPFLCKPKDDLRKDARMMEFTAMINRLLSKYSESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRHILQDIYITCGKFDRQKTNPQVKRIYDQCQGKIPESEMLKTKILPLFPPVFHRWFLNTFSEPAAWFRARIAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNMIDGLGITGYEGIFLRVCEITLSVLRSHRDTLMSILETFIHDPLVEWTKSHKSSGVEVQNPHAQLAISNIEARLRGVVVGVGAAPSLPLAVEGQARRLIAEAVAHKNLGKMYIWWMPWF 2721
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15422168 15448297 + MELO3C013324.2.1 Cme01g01220 318196

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01220 2721 Pfam FAT domain 1799 2177 IPR003151 GO:0005515
Cme01g01220 2721 Pfam FATC domain 2690 2721 IPR003152 GO:0005515
Cme01g01220 2721 ProSiteProfiles FATC domain profile. 2689 2721 IPR003152 GO:0005515
Cme01g01220 2721 Gene3D Tetratricopeptide repeat domain 1735 2115 IPR011990 GO:0005515
Cme01g01220 2721 PANTHER SERINE/THREONINE-PROTEIN KINASE ATR 57 2717 - -
Cme01g01220 2721 MobiDBLite consensus disorder prediction 1413 1427 - -
Cme01g01220 2721 Pfam UME (NUC010) domain 1098 1198 IPR012993 GO:0004674
Cme01g01220 2721 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 2378 2691 IPR000403 -
Cme01g01220 2721 Gene3D - 2348 2462 - -
Cme01g01220 2721 SUPERFAMILY ARM repeat 311 1352 IPR016024 -
Cme01g01220 2721 SUPERFAMILY Protein kinase-like (PK-like) 2308 2653 IPR011009 -
Cme01g01220 2721 SUPERFAMILY TPR-like 1735 2106 IPR011990 GO:0005515
Cme01g01220 2721 Gene3D - 2518 2677 IPR036940 GO:0016301
Cme01g01220 2721 MobiDBLite consensus disorder prediction 1413 1441 - -
Cme01g01220 2721 Gene3D - 848 1228 IPR011989 -
Cme01g01220 2721 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 57 2717 - -
Cme01g01220 2721 MobiDBLite consensus disorder prediction 2116 2136 - -
Cme01g01220 2721 ProSiteProfiles FAT domain profile. 1654 2267 IPR014009 -
Cme01g01220 2721 CDD PIKKc_ATR 2375 2651 - -
Cme01g01220 2721 SMART pi3k_hr1_6 2405 2710 IPR000403 -
Cme01g01220 2721 SMART UME_cls 1095 1201 IPR012993 GO:0004674
Cme01g01220 2721 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 2544 2564 IPR018936 GO:0016301
Cme01g01220 2721 SMART FATC_2 2689 2721 IPR003152 GO:0005515
Cme01g01220 2721 Pfam Phosphatidylinositol 3- and 4-kinase 2405 2650 IPR000403 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01220 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] - csv:101212807 5257.19
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01220 Cme-Chr1:15422168 Cme02g01970 Cme-Chr2:25940494 4.48E-79 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g215 . . . . . Bpe12g00133 . . . . . . . . Sed04g3826 Cpe04g00609 . Bhi05g01671 Tan02g0643 Cmetu01g0717 . Hepe02g0401 . . Cla02g00402 Cam02g0407 Cec02g0407 Cco02g0423 Clacu02g0410 Cmu02g0406 Cre02g0741 . . . . . Csa07g00128 . Cme01g01220 . Blo13g00493 . . . . . Bma08g00743 . . . Cma11g01361 . Car11g01387 . . . . . . . . . . . . . . . . . Lsi11g01223 . Chy01g00655 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012534 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme01g01220 Cme_Chr01 FPKM 9.26843 12.426264 16.682232 19.143953 9.384368 12.3996 12.916965 36.85202 40.533768 44.301804