Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01240 ATGTTATCGGAGTTGATGAACTTTTTGAGGGCCTGTTTCCAGTCGAGCTCCGATCGGTATGGGGCGGGGGAAATCAGGGGGCGGCAAGACGGGTTGCTATGGTACAAAGATAGTGGACAACACTTGAATGGAGATTTTTCAATGTCTGTGATTCAGGCCAACAATTTGCTTGAAGATCAAAGCCAGATTGAGTCAGGCAGTTTGAGCTTACAAGAGTCTGGCCCCAGAGGAACATTTGTTGGTGTGTATGATGGCCATGGAGGCCCTGAGACTTCTCGGTATATCTGTGATCATCTTTTCCAGCATCTCAAGAGATTTGCTTCTGAGCAAGACTTAATGTCTGCGGATGTAATACGCAAGGCGTTTCAAGCGACAGAAGAAGGTTTTCTTTCAATAGTTCGAAGTCAATGGCCAACAAATCCTCAAATAGCAGCTGTGGGTTCATGCTGTCTAGTTGGTGTAATTTGTGATGGGACTCTCTATGTTGCAAATCTAGGTGATTCACGTGCTATTTTGGGTAGAGCAGTGAAGGCAACTGGCGAGGTTCTAGCCATTCAGTTATCAACAGAGCACAATGTTTCTAATGAGTCAGTGCGGCTAGAGCTGCAGTCTTTGCACCCTGATGACCCACAAGTTGTGGTTTTAAGGCATAATGTTTGGCGAGTAAAGGGCATAATACAGATTTCCAGATCCATAGGCGACGTGTACTTGAAAAAAGCTGAGTTCAATAGAGAACCATTGTATGCAAAGTTTCGAGTTCAGGAACCTTTCAGAACGCCATTTTTGAGCTCTGAACCAGCCATTTCTGAGATCCAGTTGAAACCAGATGATCAATTTGTTATATTTGCATCAGATGGTTTGTGGGAGCACCTTAGCAATCAGGAAGCGGGAAGTGCAAGAAGACTGGTCAGAGCTGCACTTCAAGTAGCTGCAAAGAAAAGAGAAATGAGGTACTCAGATTTGAAGAAGATCGGCCGTGGCGTTCGTCGCCATTTCCATGATGACATCACTGTGGTGGTTGTATTTCTTGATACAAATCTGCTCTTCAAAGCTAGCTCCACGAAGAGCATGAGTGTCTCACTTCGAGGCGGTGGACTCAACCGGCTTCCTAACTCTTTATCCCCCCTCACTACGCCCGTGTAG 1143 45.67 MLSELMNFLRACFQSSSDRYGAGEIRGRQDGLLWYKDSGQHLNGDFSMSVIQANNLLEDQSQIESGSLSLQESGPRGTFVGVYDGHGGPETSRYICDHLFQHLKRFASEQDLMSADVIRKAFQATEEGFLSIVRSQWPTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAILGRAVKATGEVLAIQLSTEHNVSNESVRLELQSLHPDDPQVVVLRHNVWRVKGIIQISRSIGDVYLKKAEFNREPLYAKFRVQEPFRTPFLSSEPAISEIQLKPDDQFVIFASDGLWEHLSNQEAGSARRLVRAALQVAAKKREMRYSDLKKIGRGVRRHFHDDITVVVVFLDTNLLFKASSTKSMSVSLRGGGLNRLPNSLSPLTTPV 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15763954 15768089 - MELO3C013336.2.1 Cme01g01240 318216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01240 380 Pfam Protein phosphatase 2C 72 299 IPR001932 -
Cme01g01240 380 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Cme01g01240 380 ProSiteProfiles PPM-type phosphatase domain profile. 45 343 IPR001932 -
Cme01g01240 380 SUPERFAMILY PP2C-like 49 344 IPR036457 -
Cme01g01240 380 SMART PP2C_4 37 341 IPR001932 -
Cme01g01240 380 CDD PP2Cc 46 343 IPR001932 -
Cme01g01240 380 Gene3D - 34 352 IPR036457 -
Cme01g01240 380 PANTHER ALPHABET, ISOFORM E-RELATED 5 369 - -
Cme01g01240 380 SMART PP2C_SIG_2 58 343 IPR001932 -
Cme01g01240 380 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 369 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g01240 Cme11g00367 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01240 Cme-Chr1:15763954 Cme06g02359 Cme-Chr6:30882718 0 dispersed
Cme01g01240 Cme-Chr1:15763954 Cme11g00367 Cme-Chr11:3727600 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01240 - - csv:101211601 726.857