Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01263 ATGGACGACGGGGAGCTTGATTTTTCAAATCAGGATGTTTTTTCCAGCCCTAATATCGAGATTCCAAGCAGTTGTTCAATGGATAGTTTCTTTGATGAACTTCTCAAAGATACTCATACTTGTACTCATACACATACTTGCAATCCACCAGGCCCTGACTACTCTCATACCCACACATGTTTTCATGTCCACACTAAAATTGTCCCTGCCCCATCTGAAGAAGACAAGGTTGTTACTGATGATACTGCTGAATCAACTGAGAAGAAGTCGAAGAAACGTCCATTGGGTAACCGTGAAGCTGTTCGTAAGTACCGTGAGAAGAAGAAGGCTAGGGCAGCCTCATTAGAGGATGAGGTTGTTAGGTTGAGGGCTTTGAATCAGCATTTGATGAAGAGGCTGCAGGGGCAAGCAGCACTTGAGGCTGAGATTGCTAGGCTTAAGTGTTTGCTTGTTGATATTAGGGGGAGAATTGAAGGGGAGATTGGTTCTTTCCCTTACCAGAAAGCTGTTAATCCTAACTTGTCCAACCCAAGCATGCCTGGTGCTTATGTGATGAACCCATGTAATATGCAGTGTGAGGATCAGGTTTACTGCCTCCATCCTGGGGTCGATGGCAGCAGAAGCAGTGAAGGTGCTGTGATTAATGGACAAAGCTTTGGTGCTTGTGAATTTGAAAATCTTCAATGTTTGGCAAATCATGACTCAGGATCAAAAGAACTACCTGGGTGTGGAGTAGGGAATGCGGTTTCAACTGATATTTCTTCAGGGGCGACGAAGAAAAAAGCAAAATAA 792 44.07 MDDGELDFSNQDVFSSPNIEIPSSCSMDSFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPSEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLMKRLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLSNPSMPGAYVMNPCNMQCEDQVYCLHPGVDGSRSSEGAVINGQSFGACEFENLQCLANHDSGSKELPGCGVGNAVSTDISSGATKKKAK 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16006628 16009363 - MELO3C013357.2.1 Cme01g01263 318239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01263 263 Coils Coil 98 132 - -
Cme01g01263 263 PANTHER BASIC LEUCINE ZIPPER 23 1 241 - -
Cme01g01263 263 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Cme01g01263 263 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Cme01g01263 263 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Cme01g01263 263 MobiDBLite consensus disorder prediction 73 98 - -
Cme01g01263 263 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700|GO:0006355
Cme01g01263 263 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 241 - -
Cme01g01263 263 Gene3D - 75 153 - -
Cme01g01263 263 CDD bZIP 91 144 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g01263 Cme11g00379 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01263 Cme-Chr1:16006628 Cme11g00379 Cme-Chr11:3820752 2.38E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40743 PF07716 bZIP_2 8.30E-14 CL0018 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01263 K25785 - csv:101208161 513.072