Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01273 ATGCCTTACTTTGCACAACTTCCCACAAAACAAACTGCCTTCTCTACCTTTTCCCTCCCTTTTCTAATTTCAATGAACATCTTCCGCCGCTCTCCCCCGTCCTCCTCCGCCCTCAAATGGCTCGGCTTGGTTTCCGCCATCTGGGTCCAATCCATCTCTGGCAACAACTACACCTTCTCCAACTACTCCGCCGCTCTTAAATCCCTCTTGAATCTCTCTCAGCTCCAACTCAACAATCTCTCCGTCGCCAAAGACCTCGGAAAAGCATTCGGTCTCCTCGCCGGCCTCTCCTCCGACCGCCTCTCCACTTCTCTCCTCCTCTTCATCGGCTCCATCGAAGGCCTTATTGGTTACGGCGCTCAATGGCTCGTTGTCAGTCGAAAAATCAAACCCCTCCCTTATTGGCAGATGTGTATCTTTCTGTGTATGGGAGGGAATAGCACGACTTGGATGAACACCGGTGTGCTTGTTACTTGCTTAAGAAACTTCCGGCGAGACAGAGGAACTGTTTCTGGTATTCTCAAAGGCTACATCGCTCTCAGTACCGCCATTTTTACAGATCTTTGTTCCGCTCTTTTCTCTGATAATCCTTCTTCTTTTCTCGCCCTTCTCTCCCTTGTCCCCTTCATCGTTTGCCTTACTGCTATTCTCTTCCTTCGTGAAATCCCCTGTTCCGCCGATGATGAAACAGAGAACTTCAAATACTTTTGGGTACTTAACGCCGTTTCCGTCGCCGTTGCCGTCACTCTCTTGGTATTTGATTCTATTCCAAATCCAAACTCATTCCTATCGAGAATCTTCTCCATCATTTTGCTGAGTTTGCTGGCTTCACCTCTGGTAATCCCACTTCACTCGTTCTTGAAAAACAGGGGTGGGTCCGGTGAAGTTGGAGAGGCGCTGCTGGCGGGTGAGAGTGCGGCGGACGATGCGGTGGAGGGGAAGCCAGCGATCGGAGAAGATCACACGATTGTTGAGGCGATGAAGACGGTTGAATTTTGGATTCTGTTCGTGTCGTTTTTGTGTGGAGTGGGTACGGGATTGGCAGTGATGAACAATATGGGACAGATTGGATTGGCTCTTGGGTACGAGGACGTTTCGATCTTCATATCGTTGATGAGTATTTGGGGTTTTTTTGGCCGGATTTTATCGGGATCGGCATCGGAGCATTTCATCAAGTAA 1179 49.28 MPYFAQLPTKQTAFSTFSLPFLISMNIFRRSPPSSSALKWLGLVSAIWVQSISGNNYTFSNYSAALKSLLNLSQLQLNNLSVAKDLGKAFGLLAGLSSDRLSTSLLLFIGSIEGLIGYGAQWLVVSRKIKPLPYWQMCIFLCMGGNSTTWMNTGVLVTCLRNFRRDRGTVSGILKGYIALSTAIFTDLCSALFSDNPSSFLALLSLVPFIVCLTAILFLREIPCSADDETENFKYFWVLNAVSVAVAVTLLVFDSIPNPNSFLSRIFSIILLSLLASPLVIPLHSFLKNRGGSGEVGEALLAGESAADDAVEGKPAIGEDHTIVEAMKTVEFWILFVSFLCGVGTGLAVMNNMGQIGLALGYEDVSIFISLMSIWGFFGRILSGSASEHFIK 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16109525 16113024 + MELO3C013366.2.1 Cme01g01273 318249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01273 392 SUPERFAMILY MFS general substrate transporter 36 390 IPR036259 -
Cme01g01273 392 Pfam Nodulin-like 39 283 IPR010658 -
Cme01g01273 392 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 29 304 - -
Cme01g01273 392 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 304 - -
Cme01g01273 392 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 302 392 - -
Cme01g01273 392 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 302 392 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme01g01273 Cme11g00393 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01273 Cme-Chr1:16109525 Cme07g02031 Cme-Chr7:25322006 2.37E-67 dispersed
Cme01g01273 Cme-Chr1:16109525 Cme11g00393 Cme-Chr11:3987240 2.02E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01273 - - cmo:103490296 705.286