Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01350 ATGGAGTTTCTGAGTCCTTTTTATTTGTTCTTCTCCTTTTTTTCTCTTCTTCTCTTTGTCGTTTTTCTACGAAGTTTACGATGTAAACTTCGCTACCCTCCTGGTCCTACTGGATTGCCCATCATTGGTAACATGTTGATGATGGACCAACTCACCCACCGTGGCCTCGCTCATCTTGCCACCATCTACGGTGGACTCTTCCACCTTCGCCTCGGCATCCTTCACATGGTAGTTGTCTCTACGCCAGACATGGCACGAGAATTCCTCCAAGTTCAAGACATCGCCTTTGCAAACAGACCTGCAAACGTTGCAATCTCATATCTCACCTATGATCGTGCCGATATGGCCTTTGCCAATTACGGTCCATTTTGGCGTCAAATGCGAAAGATTTGCGTCGTCAAACTCTTTAGCCGTCGACGCATCGAGTCATGGGCGTCTGTGCGTGACGAAGTTGACGCCCTAATCAAAATCGTTTCGAGTAAAATCCAGCAACCGGTGAATATTGGTGATCTAGTTTTTAGCTTGACACGAAACATAACGTACAAGGCTGCATTTGGATCGAGCTCGCATGAAGGACAAGACGAGTTCGTTAAGATCTTGCAAGAATTCTCTAAATTGTTTGGAGCTTTTAATATTGCAGATTTTTTGCCATGGTTGGGATGGATTCATGCTCGAGAATTCAATGAAAGATTGGCAAAAGCTAGAAGAGATCTTGATATGTTCATAGATAGCATAATCGATGAACATTTACAAAAGAAAATGAAGAAATTAAAGGGAAAAACCGTTGACGATGAAGAAGATTCAGATATGGTTGATGAACTAATGGCATTTCTTGTTGATGATTCAAGTAGCAATGAGTTTGATGATTCCCAATCAGTTCTTAAGCTCACTAGAGACAATATCAAAGCCTTAATCATGGATGTAATGTTCGGTGGAACGGAAACGGTAGCTTCGGTGATAGAATGGGCAATGGCAGAATTAATGAAAAATCCTGAAGAGCTCAATAAGCTCCAACAAGAACTCACCCTGACCGTTGGATTGGATAGGAATGTCCACGAATCGGACCTCCAGAATCTCCCCTACTTAAAATTCGTCATCAAAGAAACCCTTCGCCTTCACCCCCCGATTCCGCTCCTCCTCCACGAGACCGCCGTCGACTCCTCCGTTGACGGCTACTTTATTCCCACCGGTTCGAGAGTCTGGATCAACGCGTGGGCGATCGGTCGAGACCGAACCGCCTGGGAAGAACCGGATCGGTTCCGGCCAGGGAGGTTTCAAAACGATGCTGCTCCGGATTTCAAAGGGAACGATTTCGAGTTCGTTCCGTTTGGGTCAGGTCGAAGATCTTGCCCCGGAATGCAACTCGGACTATATGCTTGTGAGATGGCGGTTGCGAATCTTGTTCATTGTTTTTCTTGGGAATTGCCGGGCGGAATGACGGCCGATGAGCTGGATATGAACGATTCGTTTGGACTCACTGCTCCCAGGGCGATTCGACTCGTTGCTGTACCGAGTCTTCGACTTAACTCGCCTGAGTTTAAACTCGAAAGGAAGAGGCGGGAAGATGTATAA 1572 46.06 MEFLSPFYLFFSFFSLLLFVVFLRSLRCKLRYPPGPTGLPIIGNMLMMDQLTHRGLAHLATIYGGLFHLRLGILHMVVVSTPDMAREFLQVQDIAFANRPANVAISYLTYDRADMAFANYGPFWRQMRKICVVKLFSRRRIESWASVRDEVDALIKIVSSKIQQPVNIGDLVFSLTRNITYKAAFGSSSHEGQDEFVKILQEFSKLFGAFNIADFLPWLGWIHAREFNERLAKARRDLDMFIDSIIDEHLQKKMKKLKGKTVDDEEDSDMVDELMAFLVDDSSSNEFDDSQSVLKLTRDNIKALIMDVMFGGTETVASVIEWAMAELMKNPEELNKLQQELTLTVGLDRNVHESDLQNLPYLKFVIKETLRLHPPIPLLLHETAVDSSVDGYFIPTGSRVWINAWAIGRDRTAWEEPDRFRPGRFQNDAAPDFKGNDFEFVPFGSGRRSCPGMQLGLYACEMAVANLVHCFSWELPGGMTADELDMNDSFGLTAPRAIRLVAVPSLRLNSPEFKLERKRREDV 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16873453 16876805 - MELO3C013427.2.1 Cme01g01350 318326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01350 523 Gene3D Cytochrome P450 26 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Cme01g01350 523 PANTHER CYTOCHROME P450 84A1-RELATED 7 512 - -
Cme01g01350 523 SUPERFAMILY Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme01g01350 523 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 7 512 - -
Cme01g01350 523 Pfam Cytochrome P450 33 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01350 Cme-Chr1:16873453 Cme08g00907 Cme-Chr8:5961591 0 dispersed
Cme01g01350 Cme-Chr1:16873453 Cme07g01696 Cme-Chr7:22519046 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01350 K09755 - csv:101217850 936.021