Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme01g01350 | ATGGAGTTTCTGAGTCCTTTTTATTTGTTCTTCTCCTTTTTTTCTCTTCTTCTCTTTGTCGTTTTTCTACGAAGTTTACGATGTAAACTTCGCTACCCTCCTGGTCCTACTGGATTGCCCATCATTGGTAACATGTTGATGATGGACCAACTCACCCACCGTGGCCTCGCTCATCTTGCCACCATCTACGGTGGACTCTTCCACCTTCGCCTCGGCATCCTTCACATGGTAGTTGTCTCTACGCCAGACATGGCACGAGAATTCCTCCAAGTTCAAGACATCGCCTTTGCAAACAGACCTGCAAACGTTGCAATCTCATATCTCACCTATGATCGTGCCGATATGGCCTTTGCCAATTACGGTCCATTTTGGCGTCAAATGCGAAAGATTTGCGTCGTCAAACTCTTTAGCCGTCGACGCATCGAGTCATGGGCGTCTGTGCGTGACGAAGTTGACGCCCTAATCAAAATCGTTTCGAGTAAAATCCAGCAACCGGTGAATATTGGTGATCTAGTTTTTAGCTTGACACGAAACATAACGTACAAGGCTGCATTTGGATCGAGCTCGCATGAAGGACAAGACGAGTTCGTTAAGATCTTGCAAGAATTCTCTAAATTGTTTGGAGCTTTTAATATTGCAGATTTTTTGCCATGGTTGGGATGGATTCATGCTCGAGAATTCAATGAAAGATTGGCAAAAGCTAGAAGAGATCTTGATATGTTCATAGATAGCATAATCGATGAACATTTACAAAAGAAAATGAAGAAATTAAAGGGAAAAACCGTTGACGATGAAGAAGATTCAGATATGGTTGATGAACTAATGGCATTTCTTGTTGATGATTCAAGTAGCAATGAGTTTGATGATTCCCAATCAGTTCTTAAGCTCACTAGAGACAATATCAAAGCCTTAATCATGGATGTAATGTTCGGTGGAACGGAAACGGTAGCTTCGGTGATAGAATGGGCAATGGCAGAATTAATGAAAAATCCTGAAGAGCTCAATAAGCTCCAACAAGAACTCACCCTGACCGTTGGATTGGATAGGAATGTCCACGAATCGGACCTCCAGAATCTCCCCTACTTAAAATTCGTCATCAAAGAAACCCTTCGCCTTCACCCCCCGATTCCGCTCCTCCTCCACGAGACCGCCGTCGACTCCTCCGTTGACGGCTACTTTATTCCCACCGGTTCGAGAGTCTGGATCAACGCGTGGGCGATCGGTCGAGACCGAACCGCCTGGGAAGAACCGGATCGGTTCCGGCCAGGGAGGTTTCAAAACGATGCTGCTCCGGATTTCAAAGGGAACGATTTCGAGTTCGTTCCGTTTGGGTCAGGTCGAAGATCTTGCCCCGGAATGCAACTCGGACTATATGCTTGTGAGATGGCGGTTGCGAATCTTGTTCATTGTTTTTCTTGGGAATTGCCGGGCGGAATGACGGCCGATGAGCTGGATATGAACGATTCGTTTGGACTCACTGCTCCCAGGGCGATTCGACTCGTTGCTGTACCGAGTCTTCGACTTAACTCGCCTGAGTTTAAACTCGAAAGGAAGAGGCGGGAAGATGTATAA | 1572 | 46.06 | MEFLSPFYLFFSFFSLLLFVVFLRSLRCKLRYPPGPTGLPIIGNMLMMDQLTHRGLAHLATIYGGLFHLRLGILHMVVVSTPDMAREFLQVQDIAFANRPANVAISYLTYDRADMAFANYGPFWRQMRKICVVKLFSRRRIESWASVRDEVDALIKIVSSKIQQPVNIGDLVFSLTRNITYKAAFGSSSHEGQDEFVKILQEFSKLFGAFNIADFLPWLGWIHAREFNERLAKARRDLDMFIDSIIDEHLQKKMKKLKGKTVDDEEDSDMVDELMAFLVDDSSSNEFDDSQSVLKLTRDNIKALIMDVMFGGTETVASVIEWAMAELMKNPEELNKLQQELTLTVGLDRNVHESDLQNLPYLKFVIKETLRLHPPIPLLLHETAVDSSVDGYFIPTGSRVWINAWAIGRDRTAWEEPDRFRPGRFQNDAAPDFKGNDFEFVPFGSGRRSCPGMQLGLYACEMAVANLVHCFSWELPGGMTADELDMNDSFGLTAPRAIRLVAVPSLRLNSPEFKLERKRREDV | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 16873453 | 16876805 | - | MELO3C013427.2.1 | Cme01g01350 | 318326 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme01g01350 | 523 | Gene3D | Cytochrome P450 | 26 | 505 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 443 | 452 | IPR017972 | GO:0005506|GO:0016705 | |
Cme01g01350 | 523 | PANTHER | CYTOCHROME P450 84A1-RELATED | 7 | 512 | - | - | |
Cme01g01350 | 523 | SUPERFAMILY | Cytochrome P450 | 33 | 502 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme01g01350 | 523 | PANTHER | CYTOCHROME P450 FAMILY MONOOXYGENASE | 7 | 512 | - | - | |
Cme01g01350 | 523 | Pfam | Cytochrome P450 | 33 | 496 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g01350 | Cme-Chr1:16873453 | Cme08g00907 | Cme-Chr8:5961591 | 0 | dispersed | |
Cme01g01350 | Cme-Chr1:16873453 | Cme07g01696 | Cme-Chr7:22519046 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme01g01350 | K09755 | - | csv:101217850 | 936.021 |