Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme01g01362 GGAAATACCTATAATTTAGGGATTAAAAAAAGAAGAGATGGAATCGTGTTAACGTGGATCGATCAAGAGCTTTCAACTCATCCCCTTCATCCGATTCCCTCTCTCTTCAAACTCCATCATCAAGATTCACAGATTGGCCTTTCAACACTTCCATCCCAGGAACCTCCCTCTCCTCCAACAATGGGCGATACCCGAGGTGGTTGCTGTCCACCCATGGATCTCTTCCGCTCCGAGCCCATGCAGCTGGTCCAGCTCATCATTCCCATCGAGTCTGCGCATCGCACCATCTCCTACCTCGGTGATCTCGGCCTTCTTCAGTTCAAAGATCTCAACGCGGATAAAAGCCCATTCCAGCGTACTTATGCTGCACAGATTAAAAGATGTGGAGAGATGGCACGCAAATTGAATTTTTTCAAGGAACAGATTTTGAAGGCTGGATTATCAAGCAAAAGCTCCGTGTCACAAGTTGATATCAATATAGACGACCTTGAGGTCAAACTTGGTGAGCTTGAGGCAGAACTGGTTGAGATAAATGCTAATAGTGAGAAGCTACAACGTTCCTACAATGAACTTTTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGAGAGTTTTTCACTGCAGCGCAAAGCAGTGCTGTAGAGCAGCAAAGGGAGTTCGAATCACGACGAACTGGTGGAGATTCAATAGAAGTTCCATTGTTGTTGGAACAAGAATCACTTGTGGATCAGTCAAAGCCGGTTAATTTGGGATTTCTCTCTGGTCTTGTTCCTCGGGAAAAATCTATGGCATTTGAGAGGATACTTTTTCGTGCTACTAGGGGCAATGTGTTTCTGAAGCAGACTGAAGTTGAGGATCCTGTTGCAGATCCTGTTTCTGGAGAGAAGGTTGAGAAAAATGTGTTTATTGTTTTCTACTCTGGAGAAAGAGCAAAGAGTAAAATTCTAAAAATATGTGAGGCATTTGGTGCAAATCGATACCCTTTTACTGAGGACGTGGGGAAACAAGCCCAAATGATTGCTGAGGTTTCTGGAAAACTGTCTGAGCTGAAGACTACAATAGATATAGGGCTACTGCACCGGGGTAATCTGTTGCAGACTATTGGAGAGCATTTTGAAAATTGGAATCTCCTGGCGAGGAAGGAAAAGTCCATATACCACATATTGAACATGCTTAGCCTTGATGTAACAAAAAAATGTCTCGTTGCTGAGGGGTGGGGTCCTGTTTTTGCTACAAAGCAGATTCAAGATGCACTCCAGCGTGCAGCATCTGATTCCAACTCCCAGGTTGGACCAATTTTCCAGGTTTTATTAACTACAGAAGCACCACCTACGTATTTTCGGACAAACAAATTCTCCTCTGCTTTTCAAGAAATTGTCGATGCATATGGGGTGGCAAGGTATCAAGAAGCAAATCCTGGTGTATACACCATTGTCACGTTCCCATTTCTGTTTGCTGTTATGTTTGGCGATTGGGGGCATGGAATATGTCTGTTCCTTGCAACCCTGTATTTTATATTACGGGAAAAAAAACTTTCTTCTCAGAAGCTTGGAGATATCACTGAAATGGCCTTTGGTGGACGCTATGTCATTTTGATGATGTCACTATTTTCAATATACACTGGTCTGATCTATAACGAGTTCTTTTCAGTTCCATTTGGATTGTTTGGTCGCTCAGCCTATGAATGTCGTAGTCCTGATTGCAGTGATTCTACCACTATGGGGTTGATAAAGGTGGGTTCTACATATCCATTTGGCCTGGATCCTGTATGGCACGGCACTCGAAGTGAACTTCCATTTCTCAACTCTTTGAAAATGAAAATGTCAATCCTCCTTGGAGTTGCACAAATGAACCTTGGAATTATAATAAGCTATTTCAATGCTACATTTTTTAGGAACAGCATTAATATCTGGTTCCAATTTCTACCACAAATGATATTCCTGAACAGCCTATTCGGCTATCTTTCCCTTCTCATCATCATAAAGTGGTGCACCGGTTCAAATGCTGATCTGTACCATGTAATGATATACATGTTTCTAGGCCCTACCGACGATCTGGCTGAAAACCAACTTTTTCCTGGGCAGAAAAATGTTCAGATTGTGCTACTCTTACTGGCCCTTGTTGCCGTGCCGTGGATGCTGCTTCCAAAGCCTTTTCTTTTGAAGAGACAGCATGAACAGAGGTTCCAAGGTCAATCTTATGCACCCCTTCCAAGTGGTGATGATTCCCTCGAGTTGGATTCACATCATGATTCACATGGTCATGAGGAGTTTGAGTTCAGTGAGGTTTTTGTGCATCAGCTTATTCATACCATTGAATTTGTGCTTGGAGCAGTGTCAAATACAGCTTCCTATCTTCGTCTATGGGCTTTAAGTCTTGCACACTCAGAGTTGTCAAGCGTGTTTTACGACAAGGTTCTCGTTCTATCTGCGGGGTTCAACAACATTATAATCTTAATAGTAGGCATTATTGTTTTCATTTTTGCTACGGTTGGCGTGTTGCTACTGATGGAGACTTTAAGTGCCTTCCTTCACGCACTGCGTCTTCATTGGGTCGAGTTCCAAAACAAGTTCTACGAGGGAGACGGGTACAAATTCCATCCTTTCTCATTCGCATTGCTAGATGAAGATGATGATTGA 2637 42.93 GNTYNLGIKKRRDGIVLTWIDQELSTHPLHPIPSLFKLHHQDSQIGLSTLPSQEPPSPPTMGDTRGGCCPPMDLFRSEPMQLVQLIIPIESAHRTISYLGDLGLLQFKDLNADKSPFQRTYAAQIKRCGEMARKLNFFKEQILKAGLSSKSSVSQVDINIDDLEVKLGELEAELVEINANSEKLQRSYNELLEYKLVLQKAGEFFTAAQSSAVEQQREFESRRTGGDSIEVPLLLEQESLVDQSKPVNLGFLSGLVPREKSMAFERILFRATRGNVFLKQTEVEDPVADPVSGEKVEKNVFIVFYSGERAKSKILKICEAFGANRYPFTEDVGKQAQMIAEVSGKLSELKTTIDIGLLHRGNLLQTIGEHFENWNLLARKEKSIYHILNMLSLDVTKKCLVAEGWGPVFATKQIQDALQRAASDSNSQVGPIFQVLLTTEAPPTYFRTNKFSSAFQEIVDAYGVARYQEANPGVYTIVTFPFLFAVMFGDWGHGICLFLATLYFILREKKLSSQKLGDITEMAFGGRYVILMMSLFSIYTGLIYNEFFSVPFGLFGRSAYECRSPDCSDSTTMGLIKVGSTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFRNSINIWFQFLPQMIFLNSLFGYLSLLIIIKWCTGSNADLYHVMIYMFLGPTDDLAENQLFPGQKNVQIVLLLLALVAVPWMLLPKPFLLKRQHEQRFQGQSYAPLPSGDDSLELDSHHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLVLSAGFNNIIILIVGIIVFIFATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFALLDEDDD 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16991930 17007849 + MELO3C013437.2.1 Cme01g01362 318338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme01g01362 878 PIRSF ATP6V0A1 70 878 IPR026028 GO:0000220|GO:0046961
Cme01g01362 878 Coils Coil 153 187 - -
Cme01g01362 878 Pfam V-type ATPase 116kDa subunit family 98 870 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cme01g01362 878 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 63 877 - -
Cme01g01362 878 PANTHER VACUOLAR PROTON ATPASES 63 877 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01362 Cme-Chr1:16991930 Cme08g01948 Cme-Chr8:24114689 6.73E-07 dispersed
Cme09g00617 Cme-Chr9:6526035 Cme01g01362 Cme-Chr1:16991930 4.78E-14 transposed
Cme10g00913 Cme-Chr10:6656079 Cme01g01362 Cme-Chr1:16991930 9.79E-12 transposed
Cme11g01758 Cme-Chr11:25750228 Cme01g01362 Cme-Chr1:16991930 0 transposed
Cme01g01362 Cme-Chr1:16991930 Cme03g01909 Cme-Chr3:27216754 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme01g01362 K02154 - csv:101211364 1540.78